Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Gm22240-201ENSMUST00000175225 82 ntBASIC13.18□□□□□ -0.3
P06323 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
P06323 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.18□□□□□ -0.3
P06323 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P06323 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.17□□□□□ -0.3
P06323 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.17□□□□□ -0.3
P06323 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.17□□□□□ -0.3
P06323 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.17□□□□□ -0.3
P06323 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
P06323 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
P06323 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P06323 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.16□□□□□ -0.3
P06323 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.16□□□□□ -0.3
P06323 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.16□□□□□ -0.3
P06323 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.16□□□□□ -0.3
P06323 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.16□□□□□ -0.3
P06323 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.16□□□□□ -0.3
P06323 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.16□□□□□ -0.3
P06323 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P06323 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
P06323 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
P06323 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.15□□□□□ -0.3
P06323 Gm21814-202ENSMUST00000203277 873 ntBASIC13.15□□□□□ -0.3
P06323 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.15□□□□□ -0.3
P06323 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P06323 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.15□□□□□ -0.3
P06323 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P06323 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms