Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.91□□□□□ -0.18
Cldn1O88551 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cldn1O88551 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.9□□□□□ -0.18
Cldn1O88551 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Cldn1O88551 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.9□□□□□ -0.18
Cldn1O88551 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.9□□□□□ -0.18
Cldn1O88551 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.9□□□□□ -0.18
Cldn1O88551 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.9□□□□□ -0.18
Cldn1O88551 Gm44450-201ENSMUST00000199528 114 ntBASIC13.9□□□□□ -0.18
Cldn1O88551 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.9□□□□□ -0.18
Cldn1O88551 Psmb5-202ENSMUST00000227257 622 ntBASIC13.9□□□□□ -0.18
Cldn1O88551 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.9□□□□□ -0.18
Cldn1O88551 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cldn1O88551 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cldn1O88551 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cldn1O88551 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.9□□□□□ -0.18
Cldn1O88551 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cldn1O88551 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.9□□□□□ -0.18
Cldn1O88551 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
Cldn1O88551 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.89□□□□□ -0.19
Cldn1O88551 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cldn1O88551 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.89□□□□□ -0.19
Cldn1O88551 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.89□□□□□ -0.19
Cldn1O88551 Gm12260-201ENSMUST00000122447 411 ntBASIC13.89□□□□□ -0.19
Cldn1O88551 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cldn1O88551 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.89□□□□□ -0.19
Cldn1O88551 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.89□□□□□ -0.19
Cldn1O88551 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.89□□□□□ -0.19
Cldn1O88551 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.89□□□□□ -0.19
Cldn1O88551 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cldn1O88551 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cldn1O88551 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.89□□□□□ -0.19
Cldn1O88551 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cldn1O88551 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Cldn1O88551 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Gm4995-201ENSMUST00000117247 432 ntBASIC13.88□□□□□ -0.19
Cldn1O88551 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.88□□□□□ -0.19
Cldn1O88551 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.88□□□□□ -0.19
Cldn1O88551 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.88□□□□□ -0.19
Cldn1O88551 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldn1O88551 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cldn1O88551 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldn1O88551 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldn1O88551 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldn1O88551 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms