Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfi1bO70237 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gfi1bO70237 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Gfi1bO70237 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gfi1bO70237 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gfi1bO70237 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Gfi1bO70237 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Mir2861-201ENSMUST00000175539 82 ntBASIC13.61□□□□□ -0.23
Gfi1bO70237 Mir6349-201ENSMUST00000184059 97 ntBASIC13.61□□□□□ -0.23
Gfi1bO70237 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.61□□□□□ -0.23
Gfi1bO70237 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Gfi1bO70237 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.61□□□□□ -0.23
Gfi1bO70237 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfi1bO70237 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Asic1-205ENSMUST00000228185 1818 ntBASIC13.6□□□□□ -0.23
Gfi1bO70237 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Gm15378-201ENSMUST00000121894 207 ntBASIC13.6□□□□□ -0.23
Gfi1bO70237 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Gm10698-201ENSMUST00000182663 604 ntBASIC13.6□□□□□ -0.23
Gfi1bO70237 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.6□□□□□ -0.23
Gfi1bO70237 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Gfi1bO70237 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.6□□□□□ -0.23
Gfi1bO70237 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfi1bO70237 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Gm10812-201ENSMUST00000099864 546 ntBASIC13.59□□□□□ -0.23
Gfi1bO70237 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Gfi1bO70237 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfi1bO70237 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms