Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpl35aO55142 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpl35aO55142 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.11□□□□□ -0.47
Rpl35aO55142 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.11□□□□□ -0.47
Rpl35aO55142 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.11□□□□□ -0.47
Rpl35aO55142 Gm45328-201ENSMUST00000210942 917 ntBASIC12.11□□□□□ -0.47
Rpl35aO55142 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.11□□□□□ -0.47
Rpl35aO55142 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rpl35aO55142 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Rpl35aO55142 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.1□□□□□ -0.47
Rpl35aO55142 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rpl35aO55142 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.1□□□□□ -0.47
Rpl35aO55142 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.1□□□□□ -0.47
Rpl35aO55142 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rpl35aO55142 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rpl35aO55142 Gm29707-201ENSMUST00000196325 491 ntBASIC12.1□□□□□ -0.47
Rpl35aO55142 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rpl35aO55142 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.1□□□□□ -0.47
Rpl35aO55142 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpl35aO55142 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.1□□□□□ -0.47
Rpl35aO55142 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpl35aO55142 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpl35aO55142 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.09□□□□□ -0.47
Rpl35aO55142 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rpl35aO55142 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpl35aO55142 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpl35aO55142 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpl35aO55142 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpl35aO55142 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms