Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Dancr-204ENSMUST00000132389 2347 ntBASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-4A0A075B631 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-4A0A075B631 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-4A0A075B631 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms