Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC127391.1-201ENST00000411737 98 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AL353678.1-201ENST00000422735 741 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC007283.2-201ENST00000424739 197 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 DUTP6-201ENST00000425573 462 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 ISCA1P1-201ENST00000426679 387 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 BX679664.1-201ENST00000434429 253 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 ARPC3P1-201ENST00000437218 533 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RBMX2P4-201ENST00000441256 376 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 MTND1P12-201ENST00000455231 147 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AL121769.1-201ENST00000469473 401 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RN7SL442P-201ENST00000473804 320 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU6-314P-201ENST00000516574 104 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 Vault.3-201ENST00000516676 95 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU6-445P-201ENST00000516949 107 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNA5SP337-201ENST00000517007 109 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RNU6-1220P-201ENST00000517126 108 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 RN7SKP57-201ENST00000517248 293 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC022616.3-201ENST00000523940 148 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 OR4K8P-201ENST00000578842 1048 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 MIR2682-201ENST00000580305 110 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 KC877982.1-201ENST00000602313 470 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AP000860.1-201ENST00000605250 559 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC103710.2-201ENST00000609912 942 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC245517.5-201ENST00000611529 162 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AL133173.2-201ENST00000614270 90 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 uc_338.12-201ENST00000616344 181 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AL359880.1-201ENST00000621879 266 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 CR381653.2-201ENST00000624041 768 ntBASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNX9Q9Y5X1 AC093536.2-201ENST00000565257 1406 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 MAPK10-362ENST00000641864 4484 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 Y_RNA.159-201ENST00000363674 87 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 Y_RNA.248-201ENST00000364501 109 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 MIR23A-201ENST00000385245 73 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 MTND1P23-201ENST00000416931 372 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 MTCO2P19-201ENST00000427513 598 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC133104.1-201ENST00000429100 218 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 Z99127.3-201ENST00000448158 395 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 RPS23P3-201ENST00000470993 430 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC109925.1-201ENST00000478069 331 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC026427.2-201ENST00000506228 536 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC134698.4-201ENST00000523451 826 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AP003072.2-201ENST00000527756 676 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AL133271.1-201ENST00000538229 291 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC018630.1-201ENST00000541376 925 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 RBM11P1-201ENST00000604951 799 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC017083.3-201ENST00000609955 700 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.44□□□□□ -1.86
SNX9Q9Y5X1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 SNORA9-201ENST00000384215 133 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RNU6-780P-201ENST00000391030 104 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 RNU4-55P-201ENST00000410731 137 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 YPEL5P1-201ENST00000419731 367 ntBASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.43□□□□□ -1.86
SNX9Q9Y5X1 OR4K11P-201ENST00000431829 904 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms