Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 RPL27AP8-201ENST00000424277 446 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 OR4C10P-201ENST00000434991 931 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AL591623.2-201ENST00000449978 222 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC092798.1-201ENST00000458542 409 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 snoU13.30-201ENST00000458951 104 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 RNA5SP103-201ENST00000459503 118 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC010285.1-201ENST00000470580 392 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 SERF1AP1-201ENST00000514575 187 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 MED28P6-201ENST00000558776 231 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 LINC01109-201ENST00000603837 3081 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AL589674.2-201ENST00000604304 337 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC073657.2-201ENST00000605661 303 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC104623.2-202ENST00000623477 4002 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC090617.7-201ENST00000623952 126 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 AC127459.3-201ENST00000624328 466 ntBASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA11Q9Y5H2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 Y_RNA.16-201ENST00000362421 102 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 RN7SKP95-201ENST00000362860 303 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 Y_RNA.541-201ENST00000384640 113 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 MIR105-1-201ENST00000385222 81 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AL079342.1-201ENST00000401460 267 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 Y_RNA.602-201ENST00000410535 92 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 RPS12P23-201ENST00000419579 400 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 RPS6P12-201ENST00000432491 726 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC007389.2-201ENST00000434630 306 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC144530.1-201ENST00000452862 555 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 AC097372.5-201ENST00000623665 376 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 SCARNA4-202ENST00000625402 129 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 SMG1P4-204ENST00000523028 4131 ntBASIC5.09□□□□□ -1.59
PCDHGA11Q9Y5H2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
PCDHGA11Q9Y5H2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA11Q9Y5H2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA11Q9Y5H2 AC007785.2-201ENST00000598627 1916 ntBASIC5.09□□□□□ -1.6
PCDHGA11Q9Y5H2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
PCDHGA11Q9Y5H2 SAMMSON-226ENST00000642089 1582 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORD113-8-201ENST00000363497 74 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 Y_RNA.199-201ENST00000364014 102 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-335P-201ENST00000364563 113 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-336P-201ENST00000364891 107 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-1181P-201ENST00000384191 106 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 MIR589-201ENST00000385238 99 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 MIR143-201ENST00000385300 106 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 DUTP5-201ENST00000406790 469 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORA11.5-201ENST00000408163 128 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RN7SL814P-201ENST00000487715 300 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RN7SL547P-201ENST00000490793 290 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC006427.1-201ENST00000514359 712 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORA25.14-201ENST00000516481 132 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-1012P-201ENST00000516606 109 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORA31.18-201ENST00000517043 134 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 RNA5SP165-201ENST00000517142 115 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AP006245.2-201ENST00000522004 300 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC004024.1-201ENST00000549244 247 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 MIR4659A-201ENST00000580269 81 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC060766.3-201ENST00000591442 263 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms