Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AC002545.1-201ENST00000592511 181 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AL592436.1-201ENST00000605135 558 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 ATP1B3P1-201ENST00000605365 821 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AC128687.2-201ENST00000609657 566 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AC090132.2-201ENST00000615881 347 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AC103705.1-201ENST00000619013 241 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AC112200.1-201ENST00000625015 234 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 MIR1302-1-201ENST00000637932 143 ntBASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
R3HCC1Q9Y3T6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 Y_RNA.474-201ENST00000384341 102 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 MIR607-201ENST00000385241 96 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AL590704.1-201ENST00000402856 794 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC080125.1-201ENST00000414888 684 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 FTH1P6-201ENST00000430768 320 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AL591704.1-201ENST00000432574 275 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 TPT1P12-201ENST00000448968 492 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AL645939.1-201ENST00000453429 797 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC087588.1-201ENST00000462203 316 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 TRBV1-201ENST00000476502 284 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 RPL7P43-201ENST00000478876 753 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC012181.1-201ENST00000479895 423 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 RPL31P13-201ENST00000484151 370 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC005921.1-201ENST00000510589 286 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AL359273.1-201ENST00000510918 627 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 APOOP4-201ENST00000513530 597 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC090115.3-201ENST00000553218 849 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 AC104237.2-201ENST00000612456 443 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 NOL8P1-201ENST00000508336 3529 ntBASIC4.69□□□□□ -1.66
R3HCC1Q9Y3T6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 USP8P1-201ENST00000494673 3183 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AC006504.1-201ENST00000562493 3666 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 RNU6-512P-201ENST00000364438 103 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 RNU4-76P-201ENST00000364509 141 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 SNORA51.2-201ENST00000364595 132 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 SNORA62-201ENST00000365493 153 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AL445189.1-201ENST00000405722 338 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 Z85995.1-201ENST00000415547 335 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 RPL27AP8-201ENST00000424277 446 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AL592045.1-201ENST00000429867 352 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AC109327.1-201ENST00000471666 403 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 S100A11P1-201ENST00000477525 312 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 RPL31P60-201ENST00000478450 367 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 RPL31P61-201ENST00000496160 376 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 SUMO2P6-201ENST00000505273 288 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 TBCAP3-201ENST00000512475 312 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 RNU6-1088P-201ENST00000516850 104 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AC098826.3-201ENST00000603823 466 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AC104662.1-201ENST00000604448 511 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 MIR6891-201ENST00000618788 93 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 AC011944.2-201ENST00000624440 683 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 ZNF285B-201ENST00000561698 1767 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.68□□□□□ -1.66
R3HCC1Q9Y3T6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
R3HCC1Q9Y3T6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
R3HCC1Q9Y3T6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
R3HCC1Q9Y3T6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms