Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 MIR5571-201ENST00000577998 113 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC011451.2-201ENST00000604303 598 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AC136601.2-201ENST00000604356 474 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 MTND4LP5-201ENST00000605152 292 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL158211.4-201ENST00000606988 584 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL589743.7-201ENST00000612637 233 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL118556.2-201ENST00000614375 824 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL590099.1-201ENST00000615276 138 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL031601.2-202ENST00000622650 282 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL157770.1-201ENST00000623049 439 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL118508.4-201ENST00000624142 1176 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 AL159972.1-201ENST00000625150 448 ntBASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
HDGFL3Q9Y3E1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-609P-201ENST00000365459 107 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-354P-201ENST00000383862 107 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-610P-201ENST00000384264 107 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RPL22P22-201ENST00000395439 379 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 DHFRP6-201ENST00000401776 268 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AL356379.1-201ENST00000414105 126 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC096649.2-201ENST00000416186 393 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AL109913.1-201ENST00000421173 514 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC092427.1-201ENST00000439177 601 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 SDCBPP1-201ENST00000440192 890 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RPS20P20-201ENST00000460498 340 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 DYNLL1P5-201ENST00000467158 270 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RPS29P20-201ENST00000489592 171 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 RNA5SP364-201ENST00000516938 78 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 NRON-201ENST00000517270 370 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC022861.1-201ENST00000522981 663 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC122134.1-202ENST00000569111 1201 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC005951.2-201ENST00000576282 495 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC090615.1-201ENST00000577519 154 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 AC110994.2-201ENST00000635481 492 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 MTCO1P9-201ENST00000505577 1534 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 KPNA2P1-201ENST00000458289 1591 ntBASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.79□□□□□ -2.12
HDGFL3Q9Y3E1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 RNU6-1083P-201ENST00000384022 107 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 RNU2-40P-201ENST00000410833 196 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 RPL26P9-201ENST00000457466 433 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 KLF3P2-201ENST00000465138 268 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC106872.3-201ENST00000495104 446 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 RPS29P21-201ENST00000496272 170 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 MIR514B-201ENST00000516774 80 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 RNA5SP291-201ENST00000517222 105 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 OR5AQ1P-201ENST00000527596 927 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 FAM92A1P1-201ENST00000528023 890 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC010186.2-204ENST00000537668 439 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AL359212.1-201ENST00000556608 614 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AP000403.1-201ENST00000603349 851 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AL390208.1-201ENST00000605885 644 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC107214.2-201ENST00000608204 634 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 AC013412.1-201ENST00000610687 192 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.78□□□□□ -2.12
HDGFL3Q9Y3E1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms