Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX2IPQ9Y2D8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AL354685.2-201ENST00000448218 1447 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC006020.1-201ENST00000420179 1854 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC073343.1-201ENST00000328239 651 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 Y_RNA.22-201ENST00000362492 102 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AL591416.1-201ENST00000404015 867 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC068533.1-201ENST00000418542 415 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 ATP5JP1-201ENST00000431631 322 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 MTND3P23-201ENST00000431980 347 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 CYCSP43-201ENST00000438233 310 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 MTND4LP16-201ENST00000440828 295 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AL121871.1-201ENST00000443413 436 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 HMGN2P21-201ENST00000447764 270 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC007967.1-201ENST00000455422 1159 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 MTND1P11-201ENST00000456661 876 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 RPS20P20-201ENST00000460498 340 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 RPS15AP36-201ENST00000492022 382 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC093278.1-201ENST00000494700 600 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC091951.2-201ENST00000500762 203 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC114786.4-201ENST00000508771 728 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 RNU6-875P-201ENST00000516488 106 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 RANP9-201ENST00000519957 271 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 HMGB1P41-201ENST00000520234 440 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC009994.1-201ENST00000606889 253 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 RMST_3.1-201ENST00000611651 109 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 DDX10P1-201ENST00000448545 1933 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 AC091152.2-201ENST00000591628 2569 ntBASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSX2IPQ9Y2D8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SSX2IPQ9Y2D8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SSX2IPQ9Y2D8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 Y_RNA.72-201ENST00000362894 103 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 Y_RNA.157-201ENST00000363638 102 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 Y_RNA.279-201ENST00000364763 95 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-996P-201ENST00000365438 107 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 SNORA9-201ENST00000384215 133 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 MIR454-201ENST00000390180 115 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AL136372.1-201ENST00000403060 228 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AL354719.1-201ENST00000406535 843 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-712P-201ENST00000410558 100 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 RNU2-39P-201ENST00000410604 198 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 RNU6-1068P-201ENST00000410958 103 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 CYCSP4-201ENST00000429682 331 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AL159987.2-201ENST00000432754 307 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 PMCHL2-203ENST00000457791 237 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 SNORD97-201ENST00000459187 142 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC006512.1-201ENST00000468816 291 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC233702.1-201ENST00000482905 502 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC078817.1-201ENST00000492623 435 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC116562.3-201ENST00000506136 177 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 SNORA70.24-201ENST00000517233 118 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC100870.1-201ENST00000522035 505 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC068587.5-201ENST00000528506 175 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC012669.1-201ENST00000603209 283 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC008945.2-201ENST00000606056 604 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AL121992.2-201ENST00000606262 256 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSX2IPQ9Y2D8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms