Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 UBE2DNL-203ENST00000474922 222 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC105252.1-201ENST00000503089 286 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC114981.1-201ENST00000503897 678 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 HMGB1P28-201ENST00000507778 552 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC098591.2-201ENST00000510152 315 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC118942.1-201ENST00000529674 1035 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 HIGD1AP17-201ENST00000554576 276 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 ANP32BP3-201ENST00000559213 706 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC026464.5-201ENST00000562497 722 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC023825.1-201ENST00000566704 1030 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 OR4K7P-201ENST00000580232 945 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC013476.2-201ENST00000614456 459 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC091932.3-201ENST00000624223 323 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AL159972.1-201ENST00000625150 448 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC093591.3-201ENST00000634516 308 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AL356473.1-201ENST00000406203 1408 ntBASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HHLA3Q9XRX5 AC009487.4-201ENST00000624969 3585 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 RNU6-236P-201ENST00000363886 106 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 MIR17-201ENST00000385012 84 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 RNU6-750P-201ENST00000390946 107 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 RNU2-33P-201ENST00000410344 192 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 GTF2IP7-202ENST00000436677 309 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 Z80107.1-201ENST00000436830 412 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 MTND2P20-201ENST00000440805 661 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 OR10R1P-201ENST00000441524 1141 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 MTCYBP42-201ENST00000444653 1130 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AL121769.1-201ENST00000469473 401 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 RN7SL274P-201ENST00000492268 272 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 MTCYBP16-201ENST00000509187 1129 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC008837.1-201ENST00000511513 412 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC119751.5-201ENST00000514077 770 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 RNU6-714P-201ENST00000516963 103 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 SLC2A13P1-201ENST00000531560 322 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AP005901.5-201ENST00000545779 1796 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC087897.1-201ENST00000550134 156 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 OR11H5P-201ENST00000554039 926 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 SNORD14A-201ENST00000606526 91 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC005332.10-201ENST00000612725 619 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AL162373.1-201ENST00000620433 407 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC010149.2-201ENST00000637608 315 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AC006927.2-201ENST00000639256 389 ntBASIC1.53□□□□□ -2.16
HHLA3Q9XRX5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 ELF2P3-201ENST00000445099 1506 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 CDR1-202ENST00000625883 1485 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 MTND4P27-201ENST00000450813 1354 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 MTND4P35-201ENST00000604257 1375 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 FAM133CP-201ENST00000332869 704 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 SNORA3A-201ENST00000364113 130 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 SNORA23-201ENST00000365128 182 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 RNU6-952P-201ENST00000391164 108 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 RPL7P27-201ENST00000403775 720 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 RNA5SP425-201ENST00000410336 112 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 AC068533.2-201ENST00000411872 306 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 NPM1P11-201ENST00000417106 855 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 SEPT2P1-201ENST00000419651 180 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 AL139413.1-201ENST00000421309 217 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 BX322784.1-201ENST00000455793 1077 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 RPL26P9-201ENST00000457466 433 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 RNU7-136P-201ENST00000458819 69 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 RPS20P22-201ENST00000473700 357 ntBASIC1.52□□□□□ -2.17
HHLA3Q9XRX5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms