Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC063979.1-201ENST00000415539 377 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 PPP1R11P2-201ENST00000423543 382 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 RPL23AP25-201ENST00000430973 463 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 AC025884.1-201ENST00000556034 378 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 AC105129.1-201ENST00000560250 297 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 CPDP1-201ENST00000579660 283 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 SNORD91B-202ENST00000608459 222 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 FTX_2.1-201ENST00000618816 94 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.65-201ENST00000362846 100 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-1155P-201ENST00000363554 107 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.518-201ENST00000384552 113 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-1179P-201ENST00000384667 107 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-700P-201ENST00000391043 107 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 MTCO2P33-201ENST00000402100 465 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 OR4C10P-201ENST00000434991 931 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 RPEP5-201ENST00000441137 268 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AL358232.1-201ENST00000448030 501 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 RPL23AP2-201ENST00000471227 466 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AC098869.1-201ENST00000481627 292 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 RN7SL810P-201ENST00000493031 276 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AC008489.1-201ENST00000524271 483 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 MIR5699-201ENST00000578903 90 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AL450345.1-202ENST00000605741 3881 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AC004656.1-201ENST00000568479 4951 ntBASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
ZC3H4Q9UPT8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.180-201ENST00000363867 113 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.183-201ENST00000363882 113 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.297-201ENST00000364950 91 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.324-201ENST00000365165 102 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 RPS12P23-201ENST00000419579 400 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 AC104332.1-201ENST00000440471 797 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 NDUFB4P9-201ENST00000511646 388 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 GMPSP1-201ENST00000514075 579 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-513P-201ENST00000516104 104 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-1095P-201ENST00000516148 108 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 RNA5SP143-201ENST00000516936 115 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 AC109329.1-201ENST00000518744 317 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 AC034114.1-201ENST00000520293 285 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 LRRC37A5P-203ENST00000580181 585 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 BX005214.3-202ENST00000619809 325 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 AL731532.2-201ENST00000623542 1953 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 ZNF137P-201ENST00000456718 1920 ntBASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ZC3H4Q9UPT8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 SNORA71.2-201ENST00000364941 134 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 Y_RNA.539-201ENST00000384635 107 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 MIR521-1-201ENST00000384902 87 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 RNA5SP317-201ENST00000410176 116 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 RNU2-33P-201ENST00000410344 192 ntBASIC5.8□□□□□ -1.48
ZC3H4Q9UPT8 RNU6-121P-201ENST00000410525 99 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms