Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-842P-201ENST00000384269 107 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC063979.1-201ENST00000415539 377 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC114482.1-201ENST00000418010 247 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 RPS12P23-201ENST00000419579 400 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 HMGB1P12-201ENST00000438594 598 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 RPS24P13-201ENST00000442520 397 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 RNU7-187P-201ENST00000458985 68 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 SCARNA22-201ENST00000503991 125 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.661-201ENST00000516003 99 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 SCARNA16.2-201ENST00000516520 172 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-307P-201ENST00000516743 106 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 NDUFB4P11-201ENST00000560510 395 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC022968.1-201ENST00000567372 442 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 SNORD84-203ENST00000584275 78 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC005014.2-201ENST00000607795 599 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AL713922.2-201ENST00000619384 716 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 AC034229.5-201ENST00000624258 185 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 Z69720.2-201ENST00000624755 279 ntBASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.96□□□□□ -1.78
CDC42EP3Q9UKI2 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.193-201ENST00000363979 102 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-596P-201ENST00000365395 98 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.527-201ENST00000384573 102 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.557-201ENST00000384680 107 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.645-201ENST00000391229 102 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-55P-201ENST00000411092 107 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL160275.2-201ENST00000412010 394 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC009237.10-201ENST00000414112 510 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 CYP4F29P-201ENST00000420685 446 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL451062.2-201ENST00000427515 271 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC079780.1-201ENST00000428259 207 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC097713.2-201ENST00000430199 356 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC108059.2-201ENST00000434626 151 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 HSPD1P21-201ENST00000436541 245 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RPL7AP61-201ENST00000443410 636 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RPL5P30-201ENST00000465511 891 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 MTATP8P1-201ENST00000467115 207 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AP000926.1-201ENST00000479573 241 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC022493.2-201ENST00000506122 481 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC008716.1-201ENST00000511084 513 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RNU1-6P-201ENST00000516290 144 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 SNORD116.3-201ENST00000517176 78 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 GNAI2P1-201ENST00000541815 315 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 HMGB3P26-201ENST00000560051 582 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC008269.2-201ENST00000561915 1105 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-85P-201ENST00000605989 107 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 SNX18P1Y-201ENST00000616231 511 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RMST_4.1-201ENST00000616886 107 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDC42EP3Q9UKI2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms