Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-566P-201ENST00000516790 107 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 MIR2116-201ENST00000517221 80 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 HPRT1P3-201ENST00000539521 576 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 RN7SL600P-201ENST00000581811 299 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 AC025946.2-201ENST00000603398 234 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 AL161729.3-201ENST00000603533 673 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 DUSP12P1-201ENST00000612874 516 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 AC126177.8-201ENST00000618339 1015 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 RN7SKP44-201ENST00000363602 316 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 RNA5SP189-201ENST00000364920 115 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.315-201ENST00000365117 102 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 RNU6-1297P-201ENST00000384415 104 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 SNORA37-201ENST00000384504 129 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 MIR301A-201ENST00000385261 86 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AL451062.2-201ENST00000427515 271 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AL669831.1-202ENST00000428504 417 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC018644.1-201ENST00000429934 551 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC005019.1-201ENST00000436455 431 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 RPL21P41-201ENST00000459863 264 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC146944.2-203ENST00000502493 354 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 TBCAP3-201ENST00000512475 312 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC139495.1-202ENST00000513164 354 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 SNORA25.17-201ENST00000517184 124 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 TVP23BP1-201ENST00000557500 617 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC007151.1-201ENST00000572774 483 ntBASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DDX41Q9UJV9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNU1-14P-201ENST00000362759 152 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNA5SP307-201ENST00000362863 116 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNU6-1167P-201ENST00000363227 94 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 SNORA63-201ENST00000363450 132 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.212-201ENST00000364177 102 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNA5SP175-201ENST00000364275 119 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 MIR607-201ENST00000385241 96 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RPS4XP7-201ENST00000406274 780 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNA5SP239-201ENST00000410218 129 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 VN1R36P-201ENST00000414936 291 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RPL23AP25-201ENST00000430973 463 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RPS6P12-201ENST00000432491 726 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AL132765.1-201ENST00000434165 553 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC005921.1-201ENST00000510589 286 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNU6-559P-201ENST00000516151 98 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNA5SP519-201ENST00000516480 119 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNA5SP291-201ENST00000517222 105 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RNA5SP454-201ENST00000517231 127 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AL121821.2-201ENST00000556081 394 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 MIR4790-201ENST00000577799 79 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AC020914.4-201ENST00000597690 277 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AL160290.3-201ENST00000604869 165 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AL133255.1-201ENST00000606374 441 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 FAM27D1-201ENST00000612308 341 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 AL512643.1-201ENST00000635735 524 ntBASIC4.87□□□□□ -1.63
DDX41Q9UJV9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.87□□□□□ -1.63
DDX41Q9UJV9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms