Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AL445433.1-201ENST00000457507 257 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AC139453.3-201ENST00000493276 369 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 HMGB1P35-201ENST00000503360 598 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 RNU7-175P-201ENST00000515915 61 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.706-201ENST00000516933 99 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AF186190.1-201ENST00000517470 480 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AC010186.2-204ENST00000537668 439 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AC053481.4-201ENST00000583164 216 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 RPL23AP78-201ENST00000599928 470 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MIR6839-201ENST00000620425 113 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 SNORA7.2-201ENST00000364446 145 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RNU6-1062P-201ENST00000383908 107 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RNU6-708P-201ENST00000384217 107 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.785-201ENST00000384290 109 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RNY3P4-201ENST00000384428 101 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RPL21P75-201ENST00000396599 483 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RPL21P28-201ENST00000401418 483 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RNU2-71P-201ENST00000411395 189 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 DDX39BP1-205ENST00000422507 192 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AL590556.1-201ENST00000423231 483 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RPS17P8-201ENST00000434525 335 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC009237.8-201ENST00000445492 379 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RPL21P11-201ENST00000461458 483 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RPL21P39-201ENST00000463605 483 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC087190.1-201ENST00000484462 480 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC107032.1-201ENST00000485945 480 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC132942.1-201ENST00000486753 483 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RN7SL814P-201ENST00000487715 300 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC093591.1-201ENST00000491435 481 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RPL21P16-201ENST00000495531 483 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC098976.1-201ENST00000513014 541 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC010265.1-201ENST00000513509 211 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 RN7SKP260-201ENST00000516907 149 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AP001282.2-201ENST00000616149 309 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AP001273.1-201ENST00000624493 3152 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 AC007785.2-201ENST00000598627 1916 ntBASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXD3Q9UJU5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RN7SKP95-201ENST00000362860 303 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.84-201ENST00000363011 104 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RNU6-336P-201ENST00000364891 107 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 OR1L6-202ENST00000373684 1044 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.439-201ENST00000384119 94 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RNU6-72P-201ENST00000384285 79 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 MIR589-201ENST00000385238 99 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AL078599.1-201ENST00000402075 293 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AL590762.4-201ENST00000425885 253 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 C4BPAP2-201ENST00000428434 478 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 MTCO3P29-201ENST00000432119 779 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 BX679664.1-201ENST00000434429 253 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AL513124.1-201ENST00000450410 614 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC097484.1-201ENST00000471148 389 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RPS23P5-201ENST00000495419 428 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC023424.1-201ENST00000496058 459 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RNU6-138P-201ENST00000515952 107 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RN7SKP147-201ENST00000517154 244 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 RNU6-111P-201ENST00000517179 105 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 IGKV2-23-201ENST00000518729 323 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AP002770.2-201ENST00000543613 532 ntBASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXD3Q9UJU5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms