Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 RNU4-50P-201ENST00000364361 141 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTN3Q9P232 CYCSP33-201ENST00000414485 327 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 RPL23AP1-201ENST00000428990 471 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 AC087588.1-201ENST00000462203 316 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 RPL23AP2-201ENST00000471227 466 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 AC007016.1-201ENST00000512110 244 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 APOOP4-201ENST00000513530 597 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 SNORA25.11-201ENST00000515935 105 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 RNU6-143P-201ENST00000516942 93 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 RN7SKP40-201ENST00000517211 242 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 RN7SKP92-201ENST00000517266 244 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 CBX3P8-201ENST00000532412 525 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTN3Q9P232 SNORD39.4-201ENST00000620099 78 ntBASIC5.04□□□□□ -1.6
CNTN3Q9P232 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTN3Q9P232 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTN3Q9P232 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 AL592182.3-201ENST00000642132 3304 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 SALL4P2-201ENST00000423288 2910 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 RNU6-1279P-201ENST00000383917 103 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 RNU6-209P-201ENST00000384118 107 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 SNORA36C-201ENST00000384289 132 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 Y_RNA.515-201ENST00000384535 112 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 MIR129-1-201ENST00000384972 72 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 MTCO3P19-201ENST00000415864 321 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 SUMO1P3-201ENST00000439961 304 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 FCF1P4-201ENST00000448326 183 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 AC020890.1-201ENST00000491837 504 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 FTH1P9-201ENST00000513251 355 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 RNU6-1023P-201ENST00000516137 106 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 AL390726.5-202ENST00000564800 256 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 AC006600.1-201ENST00000572529 153 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 AL445487.1-201ENST00000415694 1580 ntBASIC5.03□□□□□ -1.6
CNTN3Q9P232 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CNTN3Q9P232 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTN3Q9P232 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNTN3Q9P232 OR14L1P-202ENST00000641545 3009 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 AC000123.3-201ENST00000624029 4975 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 Y_RNA.222-201ENST00000364264 102 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 SNORA71.2-201ENST00000364941 134 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 MIR301A-201ENST00000385261 86 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 Z98745.1-201ENST00000402553 494 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 AL591034.2-201ENST00000402839 359 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 RNU6-325P-201ENST00000411132 105 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 MTATP6P4-201ENST00000427725 675 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 AL162591.2-201ENST00000449634 317 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 RNU6-1037P-201ENST00000459571 107 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 AC113155.1-201ENST00000511141 769 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 Y_RNA.687-201ENST00000516558 91 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 SNORA40.15-201ENST00000516884 107 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 HIGD1AP5-201ENST00000529959 259 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 AP001781.1-201ENST00000530977 207 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 AL121603.1-201ENST00000553815 142 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.02□□□□□ -1.61
CNTN3Q9P232 MIR1273C-201ENST00000578669 77 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 CPDP1-201ENST00000579660 283 ntBASIC5.02□□□□□ -1.61
CNTN3Q9P232 MIR4715-201ENST00000584117 79 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms