Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AP000254.1-201ENST00000609934 520 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC091925.2-201ENST00000625059 256 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AL159972.1-201ENST00000625150 448 ntBASIC1.6□□□□□ -2.15
CCDC88CQ9P219 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC88CQ9P219 MIR16-1-201ENST00000385271 89 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 AL158050.1-201ENST00000416077 457 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 AP1B1P2-201ENST00000416196 106 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC88CQ9P219 MTCO3P43-201ENST00000440974 771 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC88CQ9P219 AC008379.1-201ENST00000463655 464 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC88CQ9P219 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC88CQ9P219 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC88CQ9P219 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC88CQ9P219 SDR42E1P2-201ENST00000614861 481 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 SDR42E1P4-201ENST00000620894 481 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 uc_338.20-201ENST00000621563 178 ntBASIC1.59□□□□□ -2.15
CCDC88CQ9P219 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 SNORD65C-201ENST00000390962 71 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 RNU2-42P-201ENST00000410697 113 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 TAF13P2-201ENST00000416876 286 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AL353729.1-201ENST00000425044 720 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 DEFB130D-201ENST00000426866 237 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AL512661.1-201ENST00000434586 1253 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC88CQ9P219 RPL35AP22-201ENST00000436855 335 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 HMGB1P31-201ENST00000437242 427 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC079203.1-201ENST00000487972 404 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 MTCYBP17-201ENST00000503579 789 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC147055.4-201ENST00000504399 745 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.59□□□□□ -2.16
CCDC88CQ9P219 RNU5A-7P-201ENST00000515979 116 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 RN7SKP219-201ENST00000516825 296 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 RNU6-798P-201ENST00000516912 103 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 SNORA76.2-201ENST00000517095 137 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 SNRPGP1-201ENST00000553864 222 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC023824.3-201ENST00000569003 562 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 MTCO1P40-201ENST00000574371 625 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 MIR5571-201ENST00000577998 113 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC002487.1-201ENST00000604565 994 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 uc_338.5-201ENST00000611839 155 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 DUXAP10-204ENST00000612052 616 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AC004852.3-201ENST00000614131 326 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.59□□□□□ -2.16
CCDC88CQ9P219 AL137003.2-201ENST00000606924 2538 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 SDAD1P2-201ENST00000441308 2028 ntBASIC1.59□□□□□ -2.16
CCDC88CQ9P219 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 SNORA38-201ENST00000363946 132 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 RNU6-468P-201ENST00000384003 109 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AC092573.2-201ENST00000434546 243 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 MTCO1P48-201ENST00000448024 1096 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 SNRPFP4-201ENST00000456366 242 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 RPS20P22-201ENST00000473700 357 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AC104564.1-201ENST00000493028 407 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 SNORA25.15-201ENST00000516487 89 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AC008127.2-201ENST00000549925 1075 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AC090897.2-201ENST00000581715 130 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 MIR3117-201ENST00000584034 78 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 MIR4658-201ENST00000584344 65 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC88CQ9P219 MTND4P27-201ENST00000450813 1354 ntBASIC1.58□□□□□ -2.16
CCDC88CQ9P219 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 U8.1-201ENST00000362843 134 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 U8.10-201ENST00000384260 133 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 USP9YP19-201ENST00000412165 485 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 USP9YP13-201ENST00000417797 480 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 OSTCP8-201ENST00000445117 448 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AL353691.1-201ENST00000451332 387 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 RFC5P1-201ENST00000454419 874 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 BX322784.1-201ENST00000455793 1077 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 Y_RNA.676-201ENST00000516393 96 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 RNU6-885P-201ENST00000516607 104 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 SCARNA3-201ENST00000517097 143 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AP003049.1-201ENST00000529418 457 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC093519.1-201ENST00000566109 298 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC003001.2-201ENST00000616294 831 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AC010872.1-201ENST00000624225 675 ntBASIC1.57□□□□□ -2.16
CCDC88CQ9P219 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC88CQ9P219 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms