Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RN7SL489P-201ENST00000486185 223 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC108729.1-201ENST00000487812 947 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RN7SL327P-201ENST00000488659 223 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RPS15AP36-201ENST00000492022 382 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC025881.1-201ENST00000518851 512 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 BTF3P12-201ENST00000519620 469 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC023538.1-201ENST00000534576 736 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 UBE2L4-201ENST00000587688 464 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AF038458.1-201ENST00000588406 262 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AP001269.3-201ENST00000588718 329 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AL356575.1-201ENST00000603008 283 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AL357094.1-201ENST00000603845 844 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AP000787.2-201ENST00000604432 568 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AF129408.1-201ENST00000608767 431 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC005332.10-201ENST00000612725 619 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 RN7SL853P-201ENST00000617250 223 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AL158801.5-201ENST00000623123 465 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 CU459211.1-201ENST00000635667 749 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 AC099654.8-201ENST00000637757 681 ntBASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
KLHL28Q9NXS3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 SNORD116.1-201ENST00000365628 92 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 Y_RNA.465-201ENST00000384293 102 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 RNU2-49P-201ENST00000410666 184 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 TPT1P14-201ENST00000448018 505 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC116353.3-201ENST00000511215 249 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC010486.1-201ENST00000511793 424 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC110760.3-202ENST00000515177 371 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 OR5BN1P-201ENST00000532955 829 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 MIR4435-1-201ENST00000582552 80 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC107294.1-201ENST00000609524 467 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC092608.2-201ENST00000624427 218 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 AC099786.3-201ENST00000565735 1410 ntBASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
KLHL28Q9NXS3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 SNORD62.1-201ENST00000362541 86 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 RNU6-750P-201ENST00000390946 107 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 MTCO1P27-201ENST00000448269 226 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 CACYBPP2-201ENST00000453625 678 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 MTND3P19-201ENST00000603825 345 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AL133445.2-201ENST00000611191 527 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC013562.2-201ENST00000611632 603 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AL109620.1-201ENST00000618738 1197 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC006386.1-201ENST00000619436 415 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 AC068057.2-201ENST00000624047 895 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 ZNF658B-202ENST00000615961 3375 ntBASIC2.38□□□□□ -2.03
KLHL28Q9NXS3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 MTND4P27-201ENST00000450813 1354 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 MTND4P35-201ENST00000604257 1375 ntBASIC2.37□□□□□ -2.03
KLHL28Q9NXS3 AL139276.1-201ENST00000311910 1001 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms