Protein–RNA interactions for Protein: Q9NX36

DNAJC28, DnaJ homolog subfamily C member 28, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAJC28Q9NX36 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RNU6-82P-201ENST00000363970 107 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 SNORD81.2-201ENST00000365153 76 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 Y_RNA.378-201ENST00000365652 113 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RN7SKP32-201ENST00000410167 303 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RNA5SP239-201ENST00000410218 129 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC091390.3-201ENST00000426478 338 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RPS15AP27-201ENST00000449183 343 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC004801.2-202ENST00000463559 283 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RPS20P22-201ENST00000473700 357 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AP001086.1-201ENST00000494882 321 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC146944.2-203ENST00000502493 354 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 MTND3P22-201ENST00000510932 243 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC139495.1-202ENST00000513164 354 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 APOOP4-201ENST00000513530 597 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC112206.3-201ENST00000514578 389 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RNU6-1038P-201ENST00000516516 104 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RNU6-1256P-201ENST00000516539 103 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RNU1-45P-201ENST00000517191 141 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 RANP9-201ENST00000519957 271 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 OR5D17P-201ENST00000531492 978 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AL606490.9-201ENST00000603331 271 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 AC021646.1-201ENST00000605469 484 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 MIR92B-201ENST00000607575 96 ntBASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
DNAJC28Q9NX36 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 MARK2P15-201ENST00000432204 2186 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 SNORA62.3-201ENST00000365110 153 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 Z85995.1-201ENST00000415547 335 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AL160275.3-201ENST00000423876 471 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AC087650.1-201ENST00000431445 468 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 ATP5HP2-201ENST00000433885 485 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 IFNA20P-201ENST00000436840 528 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 RPL7P28-201ENST00000437739 740 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 FAM206BP-201ENST00000510179 541 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 TTC39CP1-201ENST00000512513 755 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AC022690.1-201ENST00000526681 550 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 MIR3690-201ENST00000580266 75 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 VN1R80P-201ENST00000597126 338 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AC104662.1-201ENST00000604448 511 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 MIR15A-201ENST00000607334 83 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 MIR486-1-201ENST00000612171 68 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 AP004289.2-201ENST00000444413 1457 ntBASIC4.09□□□□□ -1.75
DNAJC28Q9NX36 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 UBE2L2-201ENST00000254302 429 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 Y_RNA.61-201ENST00000362835 102 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 Y_RNA.167-201ENST00000363735 109 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 Y_RNA.373-201ENST00000365600 103 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 Y_RNA.534-201ENST00000384599 112 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 AL590704.1-201ENST00000402856 794 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 RNU4-6P-201ENST00000410804 122 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 RNU2-71P-201ENST00000411395 189 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 CYCSP19-201ENST00000411715 316 ntBASIC4.08□□□□□ -1.76
DNAJC28Q9NX36 MTND3P8-201ENST00000412909 339 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms