Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC024060.1-201ENST00000607052 494 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC093838.1-201ENST00000613014 469 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AL445264.1-201ENST00000621719 171 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AL161781.1-201ENST00000354277 403 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 RNU1-39P-201ENST00000383897 165 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 UBE2V1P2-201ENST00000397758 440 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 VN1R51P-201ENST00000411675 945 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 USP9YP27-201ENST00000418455 438 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 RPL23AP76-201ENST00000441860 458 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC104629.1-201ENST00000494226 508 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 SUMO2P6-201ENST00000505273 288 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 RNU6-276P-201ENST00000516114 96 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 RNA5SP291-201ENST00000517222 105 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC118942.1-201ENST00000529674 1035 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 LRRC37A5P-203ENST00000580181 585 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 MIR6132-201ENST00000622083 109 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 MIR4275-201ENST00000636486 87 ntBASIC2.16□□□□□ -2.06
TREX1Q9NSU2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TREX1Q9NSU2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 RNU4-51P-201ENST00000364206 140 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 SNORA23-201ENST00000365128 182 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 Z82210.1-201ENST00000440037 231 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 BNIP3P2-201ENST00000441221 577 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 ANKRD26P4-201ENST00000455755 950 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 RPL23AP94-201ENST00000512518 302 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AC008837.2-201ENST00000513076 418 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AGGF1P5-201ENST00000567900 919 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 HMGN2P15-201ENST00000585707 270 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AC104763.3-201ENST00000613765 618 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 AC012640.5-201ENST00000623897 319 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 DDX10P1-201ENST00000448545 1933 ntBASIC2.15□□□□□ -2.07
TREX1Q9NSU2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TREX1Q9NSU2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 RNU4-82P-201ENST00000362443 140 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 RNU6-741P-201ENST00000383889 107 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 SNORD116-12-201ENST00000384468 92 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AL356421.1-201ENST00000403255 413 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AL355497.1-201ENST00000406262 551 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 RNA5SP80-201ENST00000410475 111 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 RNU6-516P-201ENST00000411381 104 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AC092047.1-201ENST00000424997 240 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 MTND5P14-201ENST00000441481 1267 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AC022634.1-201ENST00000520765 532 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 HMGN1P28-201ENST00000521340 364 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AC087465.1-201ENST00000560574 245 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AC026464.5-201ENST00000562497 722 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AC002545.1-201ENST00000592511 181 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 BNIP3P27-201ENST00000599991 412 ntBASIC2.14□□□□□ -2.07
TREX1Q9NSU2 AL606834.3-201ENST00000602615 496 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms