Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC007684.1-201ENST00000609671 477 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC068831.7-201ENST00000616954 363 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AL158209.2-201ENST00000619266 216 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AP003355.3-201ENST00000623465 114 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC124864.2-201ENST00000624736 186 ntBASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A13Q9NSD5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-1167P-201ENST00000363227 94 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-1215P-201ENST00000384441 102 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-192P-201ENST00000391253 100 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 SNORA48.8-201ENST00000391324 134 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 RPL21P17-201ENST00000397467 475 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 BTF3L4P3-201ENST00000418879 476 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AL451062.2-201ENST00000427515 271 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 VN1R34P-201ENST00000447387 883 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-420P-201ENST00000458780 107 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 RPL30P14-201ENST00000482744 348 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 OR4R1P-201ENST00000529879 463 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 OR5B19P-201ENST00000531766 928 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AL163153.1-201ENST00000554223 283 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AC024619.4-201ENST00000580924 316 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AC098826.3-201ENST00000603823 466 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AC107294.1-201ENST00000609524 467 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 AC093648.1-201ENST00000623546 606 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 MIR6863-201ENST00000636112 90 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 MTND5P42-201ENST00000637720 498 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 MTND5P17-201ENST00000418405 1603 ntBASIC3.26□□□□□ -1.89
SLC6A13Q9NSD5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC032011.1-201ENST00000611703 1549 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC022336.2-201ENST00000568966 2538 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 UBE2L2-201ENST00000254302 429 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-179P-201ENST00000363350 107 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-190P-201ENST00000384154 102 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC114491.1-201ENST00000416095 246 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 SDCBPP3-201ENST00000419629 891 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC092047.1-201ENST00000424997 240 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 RPL23AP82-202ENST00000427528 469 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AL445584.1-201ENST00000431451 330 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 MTND3P21-201ENST00000433774 331 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 RPS15AP9-201ENST00000439856 381 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 RPL7P5-201ENST00000471472 736 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC006445.2-201ENST00000510061 472 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC108078.2-201ENST00000510750 236 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 RNA5SP471-201ENST00000516971 106 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 RNA5SP290-201ENST00000517133 127 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 HMGB1P14-201ENST00000557424 591 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AL161798.1-201ENST00000604630 131 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AC013562.2-201ENST00000611632 603 ntBASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC6A13Q9NSD5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 FAM35BP-202ENST00000497389 3337 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 RNU6-1120P-201ENST00000362988 108 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 RNA5SP197-201ENST00000363357 119 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 Y_RNA.245-201ENST00000364493 95 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 SNORA24.1-201ENST00000384401 135 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 MIR200C-201ENST00000384980 68 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 MIR454-201ENST00000390180 115 ntBASIC3.24□□□□□ -1.89
SLC6A13Q9NSD5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms