Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 S100A11P1-201ENST00000477525 312 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 RPS29P19-201ENST00000479709 171 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AC110792.1-201ENST00000491826 472 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 HIGD1AP13-201ENST00000509878 289 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AC026403.1-201ENST00000518938 295 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 IGLV3-26-201ENST00000520756 302 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 MIR3149-201ENST00000584629 83 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AC008521.1-201ENST00000587471 187 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AC005255.1-201ENST00000593748 216 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 VN1R107P-201ENST00000601784 209 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 7SK.7-201ENST00000603504 247 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AC090425.1-201ENST00000610007 140 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AL355365.1-201ENST00000616480 294 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 AL049641.1-201ENST00000441055 1948 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 ZNF519P1-201ENST00000449011 1626 ntBASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PDLIM7Q9NR12 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC005005.4-201ENST00000623789 16698 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 Y_RNA.5-201ENST00000362334 102 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AL360182.1-201ENST00000397433 468 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 MIR450B-201ENST00000401182 78 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 MIR1179-201ENST00000408703 91 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 RNA5SP56-201ENST00000410277 118 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 RNU6-387P-201ENST00000411331 105 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 RPL21P24-201ENST00000413752 448 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC091286.1-201ENST00000431233 461 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC010655.1-201ENST00000449336 292 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC007967.1-201ENST00000455422 1159 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 BTF3P15-201ENST00000455606 336 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC079140.5-201ENST00000507882 310 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC008526.1-201ENST00000509149 338 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 TBCAP3-201ENST00000512475 312 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC009902.1-201ENST00000519351 183 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 HMGN1P28-201ENST00000521340 364 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 RANP3-201ENST00000530970 276 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC064801.1-201ENST00000612025 407 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AL138726.1-201ENST00000614873 333 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AC098657.3-201ENST00000620434 263 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 AL669831.3-213ENST00000636676 183 ntBASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDLIM7Q9NR12 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC103710.2-202ENST00000641454 2853 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 XIAPP3-201ENST00000312918 795 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 Y_RNA.135-201ENST00000363439 95 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 RNU6-1284P-201ENST00000363701 100 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 RNU6-1040P-201ENST00000383974 107 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 RNU6-985P-201ENST00000410182 104 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 BX682237.1-201ENST00000415016 335 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 MTCYBP10-201ENST00000424905 650 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 MTCYBP9-201ENST00000431021 303 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 RPL23AP46-201ENST00000438548 490 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC104058.1-201ENST00000448028 297 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 MTATP8P1-201ENST00000467115 207 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 RPS27AP1-201ENST00000475545 471 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 RNU6-685P-201ENST00000517088 95 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AL121576.1-201ENST00000556055 276 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC106782.4-201ENST00000568264 210 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC022655.2-201ENST00000577280 318 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC233702.9-201ENST00000581528 203 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 ATP1B3P1-201ENST00000605365 821 ntBASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.61□□□□□ -1.67
PDLIM7Q9NR12 AL391261.4-201ENST00000616012 481 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms