Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 MIR6130-201ENST00000619419 109 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 ZNF826P-207ENST00000622273 1910 ntBASIC3.11□□□□□ -1.91
SLC52A3Q9NQ40 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC118273.1-201ENST00000525324 3006 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 RNU6-1078P-201ENST00000364522 103 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 SNORA20.2-201ENST00000383922 131 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 MIR135A2-201ENST00000384854 100 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AL590002.1-201ENST00000406554 418 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AL353193.1-201ENST00000421444 268 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 OR4K11P-201ENST00000431829 904 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC119618.1-201ENST00000434191 222 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 RPL23AP83-201ENST00000434984 473 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 SETP5-201ENST00000437270 562 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 RPS12P18-201ENST00000442381 270 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 MTND2P24-201ENST00000453434 806 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC007182.2-201ENST00000489251 402 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 FAM92A1P2-202ENST00000504766 877 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC104619.4-201ENST00000510773 249 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC010493.1-201ENST00000513479 292 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 RNU6-798P-201ENST00000516912 103 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC090572.1-201ENST00000519251 160 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AL133271.1-201ENST00000538229 291 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 COX6CP3-201ENST00000580869 223 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC006504.3-201ENST00000586818 523 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 SRGNP1-201ENST00000603392 451 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AL136363.1-201ENST00000605349 337 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC007038.2-201ENST00000608095 740 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC103710.2-201ENST00000609912 942 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC245517.5-201ENST00000611529 162 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AL390240.1-201ENST00000612950 384 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 AC244258.1-201ENST00000637553 1071 ntBASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC52A3Q9NQ40 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 Y_RNA.9-201ENST00000362354 101 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 RNY4P14-201ENST00000363656 96 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 RNA5SP387-201ENST00000364226 106 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 Y_RNA.333-201ENST00000365274 102 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 RNU1-39P-201ENST00000383897 165 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 Y_RNA.409-201ENST00000383990 98 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 PTMAP5-201ENST00000393073 333 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 MIR1277-201ENST00000408536 78 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 FCF1P1-201ENST00000432690 571 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 RPS15AP9-201ENST00000439856 381 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 MTATP6P30-201ENST00000443540 664 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 MTND4P18-201ENST00000447010 465 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC234775.1-201ENST00000454247 670 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC116353.2-201ENST00000505332 712 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 OR5AQ1P-201ENST00000527596 927 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 SUB1P2-201ENST00000556401 297 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 MED28P6-201ENST00000558776 231 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 RPL21P12-201ENST00000559810 515 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AL158211.4-201ENST00000606988 584 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC004908.2-201ENST00000609090 574 ntBASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC52A3Q9NQ40 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms