Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC093899.1-201ENST00000457984 376 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RN7SL132P-201ENST00000478131 296 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC011825.1-201ENST00000484967 388 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RN7SL283P-201ENST00000489055 303 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC116562.3-201ENST00000506136 177 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RPL37P25-201ENST00000507308 276 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC108078.2-201ENST00000510750 236 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 SCARNA14-201ENST00000516903 136 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 RNU6-677P-201ENST00000516914 101 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 MTCYBP20-201ENST00000524239 1129 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC068587.5-201ENST00000528506 175 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 SUB1P2-201ENST00000556401 297 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC010546.1-201ENST00000569391 485 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 MIR4286-201ENST00000580651 93 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC007448.1-201ENST00000582714 234 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC022149.2-201ENST00000621061 203 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AL354798.1-201ENST00000622505 329 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC009161.2-201ENST00000624626 138 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 MTND5P29-201ENST00000458676 1807 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 AC068647.1-201ENST00000489539 2265 ntBASIC3.02□□□□□ -1.93
CHMP1AQ9HD42 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC010680.1-201ENST00000590024 3590 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 RNU6-61P-201ENST00000365528 109 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 RNU6-1103P-201ENST00000384150 107 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 RNU6-190P-201ENST00000384154 102 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 RNU6-198P-201ENST00000384258 104 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 Y_RNA.517-201ENST00000384551 106 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC068533.1-201ENST00000418542 415 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC245291.1-201ENST00000419501 328 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AL109913.1-201ENST00000421173 514 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 RPL7P2-201ENST00000427639 268 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 GPM6BP2-201ENST00000432046 144 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AL451074.3-201ENST00000437709 472 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 HMGB3P11-201ENST00000440127 604 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 GPM6BP1-201ENST00000446387 144 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC023194.1-201ENST00000493084 308 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 SUMO2P6-201ENST00000505273 288 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 RNA5SP165-201ENST00000517142 115 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC087499.8-201ENST00000578406 226 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AL391646.1-201ENST00000603860 190 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AL136363.2-201ENST00000604173 851 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC138649.3-201ENST00000622154 254 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AC073308.1-201ENST00000623696 305 ntBASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP1AQ9HD42 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHMP1AQ9HD42 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHMP1AQ9HD42 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHMP1AQ9HD42 Y_RNA.296-201ENST00000364930 108 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 U3.39-201ENST00000408569 239 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 AC093578.1-201ENST00000415219 368 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 HSPE1P1-201ENST00000421494 318 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 C4BPAP2-201ENST00000428434 478 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 FABP5P13-201ENST00000452144 328 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 MRPS17P3-201ENST00000465453 385 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 ARL4AP2-201ENST00000507378 601 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 HMGN1P11-201ENST00000508668 303 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 SNORD27.1-201ENST00000516319 72 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 SNORA70.19-201ENST00000516717 90 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 RNU6-914P-201ENST00000516749 109 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms