Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS11Q9H270 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS11Q9H270 AC020550.1-201ENST00000447385 163 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC007967.1-201ENST00000455422 1159 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS11Q9H270 AL049714.1-201ENST00000466686 347 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 RN7SL354P-201ENST00000469282 294 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 RPL7L1P8-201ENST00000469911 741 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS11Q9H270 AK3P4-201ENST00000504283 583 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS11Q9H270 SNORA25.10-201ENST00000515926 124 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 OR5D17P-201ENST00000531492 978 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS11Q9H270 AC006064.5-201ENST00000541782 248 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS11Q9H270 AC107016.1-201ENST00000550463 337 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 BNIP3P5-201ENST00000562290 498 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 MIR4790-201ENST00000577799 79 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 RN7SL690P-201ENST00000582087 240 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS11Q9H270 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS11Q9H270 AL121992.2-201ENST00000606262 256 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AC062037.2-201ENST00000610137 73 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 OR52H1-202ENST00000641796 1061 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.27□□□□□ -1.73
VPS11Q9H270 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS11Q9H270 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
VPS11Q9H270 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
VPS11Q9H270 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 AL139276.1-201ENST00000311910 1001 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RNU6-552P-201ENST00000362869 119 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RNU6-1252P-201ENST00000363054 104 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RN7SKP103-201ENST00000363848 320 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
VPS11Q9H270 SNORA70F-201ENST00000384142 135 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RNA5SP87-201ENST00000384155 118 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 Y_RNA.463-201ENST00000384271 102 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 Y_RNA.496-201ENST00000384444 101 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 SSXP9-201ENST00000417503 292 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS11Q9H270 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS11Q9H270 MTCO1P39-201ENST00000426148 480 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RPL21P66-201ENST00000426566 466 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC093151.1-201ENST00000427711 313 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RPS20P5-201ENST00000434808 360 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS11Q9H270 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS11Q9H270 snoU13.4-201ENST00000458916 104 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 RNU7-180P-201ENST00000459240 63 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC128713.1-201ENST00000471495 306 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 MLLT10P2-201ENST00000506434 249 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS11Q9H270 RNU6-1143P-201ENST00000516125 104 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 Y_RNA.680-201ENST00000516441 93 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS11Q9H270 IGKV1-32-201ENST00000519290 311 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.26□□□□□ -1.73
VPS11Q9H270 AP000857.1-201ENST00000532151 543 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.26□□□□□ -1.73
VPS11Q9H270 MIR4270-201ENST00000581799 70 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 MIR5690-201ENST00000583739 73 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 GLUD1P4-201ENST00000590914 418 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC104695.3-201ENST00000604052 296 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AL354984.3-201ENST00000604803 325 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC018462.2-201ENST00000605375 395 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 FAM25E-202ENST00000608562 189 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 Mico1.1-201ENST00000611698 204 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC004696.1-201ENST00000614345 607 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 AC138627.2-201ENST00000624202 601 ntBASIC4.26□□□□□ -1.73
VPS11Q9H270 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.26□□□□□ -1.73
VPS11Q9H270 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VPS11Q9H270 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS11Q9H270 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.25□□□□□ -1.73
VPS11Q9H270 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS11Q9H270 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
VPS11Q9H270 MIR331-201ENST00000362302 94 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RNU6-600P-201ENST00000362524 99 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 Y_RNA.378-201ENST00000365652 113 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 RNU6-637P-201ENST00000384050 107 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 Y_RNA.455-201ENST00000384230 98 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 SNORA37-201ENST00000384504 129 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 SOD2P1-201ENST00000396543 562 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 MIR937-201ENST00000401271 86 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS11Q9H270 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.25□□□□□ -1.73
VPS11Q9H270 AC080125.1-201ENST00000414888 684 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 TMSB10P2-201ENST00000416049 131 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AC079780.1-201ENST00000428259 207 ntBASIC4.25□□□□□ -1.73
VPS11Q9H270 AL360081.1-201ENST00000428299 555 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms