Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC098591.2-201ENST00000510152 315 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC008739.3-201ENST00000603262 127 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL356280.1-201ENST00000603614 379 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL121917.1-203ENST00000605534 577 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RNU6-88P-201ENST00000606801 100 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 RNU4-5P-201ENST00000607255 135 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC004908.2-201ENST00000609090 574 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL157392.4-201ENST00000609756 345 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 AC097655.1-201ENST00000635075 318 ntBASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SLIRPQ9GZT3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
SLIRPQ9GZT3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.03□□□□□ -2.09
SLIRPQ9GZT3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 ELF2P3-201ENST00000445099 1506 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC110491.1-201ENST00000562191 2010 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MIR422A-201ENST00000362286 90 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 RNU6-443P-201ENST00000384780 107 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MIR19A-201ENST00000384878 82 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MIR27B-201ENST00000385129 97 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AL359704.1-201ENST00000411586 781 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 RPL17P12-201ENST00000413391 526 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 RPL21P24-201ENST00000413752 448 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 SKA2P1-201ENST00000425592 390 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC244035.1-201ENST00000430042 390 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MTND1P28-201ENST00000435623 950 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 Z80107.1-201ENST00000436830 412 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 SDR42E1P3-201ENST00000438345 502 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 OSTCP8-201ENST00000445117 448 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC104389.3-201ENST00000445629 235 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC093281.2-201ENST00000510153 597 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 RNU6-390P-201ENST00000516259 103 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 SNORA31.18-201ENST00000517043 134 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC004805.2-201ENST00000605382 482 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC007349.4-201ENST00000608114 532 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC006133.1-201ENST00000617106 264 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AL136981.2-201ENST00000617319 734 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MIR6766-201ENST00000622641 72 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MIR1291-201ENST00000627649 87 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AC099654.9-201ENST00000637055 678 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 MTND5P29-201ENST00000458676 1807 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 AL359693.1-201ENST00000614959 2407 ntBASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.02□□□□□ -2.09
SLIRPQ9GZT3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 MTND5P1-201ENST00000445440 1375 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AC010329.5-201ENST00000623497 2174 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 RNU6-778P-201ENST00000363269 103 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 RNU6-1242P-201ENST00000391052 103 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AL139397.2-201ENST00000404529 772 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AL138885.1-201ENST00000405921 675 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AC092648.1-201ENST00000425870 423 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AL445669.1-201ENST00000426743 755 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 HMGB1P9-201ENST00000429856 646 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 MED14P1-201ENST00000430517 648 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 FCF1P1-201ENST00000432690 571 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AC010153.1-201ENST00000432862 727 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 USP9YP24-201ENST00000434374 697 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 RPS15AP28-201ENST00000435088 386 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 AL117351.1-201ENST00000438864 766 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 FAM103A2P-201ENST00000444122 354 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 USP9YP17-201ENST00000444617 696 ntBASIC2.01□□□□□ -2.09
SLIRPQ9GZT3 COX6CP12-201ENST00000446748 202 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms