Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 SUMO2P6-201ENST00000505273 288 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 RNA5SP480-201ENST00000516840 109 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 snoZ278.1-201ENST00000517059 112 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC095057.3-201ENST00000567102 1157 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC010928.2-201ENST00000588017 287 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC093838.1-201ENST00000613014 469 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC006213.4-201ENST00000616184 634 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC108479.2-201ENST00000617314 601 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM4Q9C037 MTND5P11-201ENST00000511037 1812 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 RNU6-661P-201ENST00000362409 107 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM4Q9C037 SNORA51.6-201ENST00000384151 125 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AL035405.1-201ENST00000400795 710 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM4Q9C037 RNU2-47P-201ENST00000410649 186 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 SNORD56-201ENST00000413522 71 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC027124.2-201ENST00000428249 105 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AL512844.2-201ENST00000433990 593 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 RFC5P1-201ENST00000454419 874 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 PPP1R2P5-201ENST00000457256 603 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC117532.1-201ENST00000514638 323 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 MTCYBP27-201ENST00000555160 670 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC110588.1-201ENST00000559699 137 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 BPTFP1-201ENST00000579209 492 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC013553.2-201ENST00000604244 589 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC135507.1-201ENST00000607214 561 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC020658.4-201ENST00000613987 684 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 AC109809.1-201ENST00000619665 545 ntBASIC1.91□□□□□ -2.1
TRIM4Q9C037 DDX10P1-201ENST00000448545 1933 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 RNA5SP325-201ENST00000363756 130 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 RNU6-707P-201ENST00000364647 95 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 RNU4-62P-201ENST00000410125 130 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 RPS20P15-201ENST00000412792 311 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 Z85995.1-201ENST00000415547 335 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 SEPT2P1-201ENST00000419651 180 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 PGBD4P6-201ENST00000421501 610 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 DNAJC19P4-201ENST00000440115 345 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRIM4Q9C037 DDX3P2-201ENST00000446138 111 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 RPS29P20-201ENST00000489592 171 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC020699.1-201ENST00000505161 445 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC022447.3-201ENST00000506865 495 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC113420.1-201ENST00000507903 571 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC011611.5-201ENST00000552477 578 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 AL354943.1-201ENST00000572103 781 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 SNORA4-201ENST00000584302 138 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM4Q9C037 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 GDI2P1-201ENST00000429312 1336 ntBASIC1.9□□□□□ -2.11
TRIM4Q9C037 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 U8.10-201ENST00000384260 133 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 U8.14-201ENST00000390843 143 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 RNU2-43P-201ENST00000410306 190 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 RNU6-1328P-201ENST00000410938 106 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 RPS7P9-201ENST00000414704 586 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 MTCYBP45-201ENST00000435243 565 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 IFNA20P-201ENST00000436840 528 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 AC092170.1-201ENST00000440211 356 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 RPL26P6-201ENST00000440913 438 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 AC104564.1-201ENST00000493028 407 ntBASIC1.89□□□□□ -2.11
TRIM4Q9C037 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM4Q9C037 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.89□□□□□ -2.11
TRIM4Q9C037 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms