Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM55Q9BYV6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 OR56B2P-202ENST00000641377 2453 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL353746.1-201ENST00000566293 6881 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL359693.1-201ENST00000614959 2407 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 SNORD74.4-201ENST00000364129 80 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.339-201ENST00000365325 102 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 MIR548K-201ENST00000408406 116 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 MIR548F5-201ENST00000408421 86 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 RNU6-607P-201ENST00000411283 108 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL353621.1-201ENST00000418219 243 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 UBE2D3P2-201ENST00000424409 445 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC092573.2-201ENST00000434546 243 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC016831.4-201ENST00000438302 307 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 ISCUP1-201ENST00000454451 448 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 RNA5SP454-201ENST00000517231 127 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 RNU6-323P-201ENST00000521915 107 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 COPS8P3-201ENST00000526024 482 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 CASP1P1-201ENST00000526345 212 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 TOMM20P2-201ENST00000540082 421 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL139395.1-201ENST00000603662 160 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL590392.1-201ENST00000604960 446 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL138726.1-201ENST00000614873 333 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL031601.2-202ENST00000622650 282 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 OR52H1-202ENST00000641796 1061 ntBASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM55Q9BYV6 AL049641.1-201ENST00000441055 1948 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC018529.3-201ENST00000624212 2254 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.135-201ENST00000363439 95 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 SNORD113.2-201ENST00000364166 89 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.212-201ENST00000364177 102 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 RPL23AP48-201ENST00000406913 488 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 RNU2-3P-201ENST00000410144 191 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC092047.1-201ENST00000424997 240 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 MYL8P-204ENST00000431574 518 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AL512844.2-201ENST00000433990 593 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 RPS5P7-201ENST00000456664 608 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AL135752.1-201ENST00000479477 471 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 PARP4P3-201ENST00000510265 317 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 RNA5SP165-201ENST00000517142 115 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC087369.1-201ENST00000520775 996 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 MIR4790-201ENST00000577799 79 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 POLR3GP2-201ENST00000588366 668 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AL050343.2-201ENST00000607338 280 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC020634.1-201ENST00000608701 549 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AL442067.2-201ENST00000614033 363 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC048347.1-201ENST00000624621 427 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 MIR6830-201ENST00000636015 70 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 AC008013.2-202ENST00000637965 364 ntBASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM55Q9BYV6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AC090740.1-201ENST00000623193 2262 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 SNORD3E-201ENST00000362899 217 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 RNA5SP479-201ENST00000364858 117 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.384-201ENST00000383909 102 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 Y_RNA.460-201ENST00000384255 102 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 MIR129-1-201ENST00000384972 72 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 CYCSP33-201ENST00000414485 327 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 RPEP3-201ENST00000425462 676 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 RPL32P28-201ENST00000443577 397 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 RPS23P3-201ENST00000470993 430 ntBASIC4.47□□□□□ -1.69
TRIM55Q9BYV6 HMGB1P30-201ENST00000492455 606 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms