Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 Y_RNA.72-201ENST00000362894 103 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 CISD1P1-201ENST00000393907 327 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 HLFP1-201ENST00000402375 499 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC012498.1-201ENST00000424037 437 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 ERLEC1P1-201ENST00000433806 578 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC098614.3-201ENST00000438957 440 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC104058.1-201ENST00000448028 297 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 RNU7-180P-201ENST00000459240 63 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 RPS20P22-201ENST00000473700 357 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 RPL21P99-201ENST00000480369 423 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 LRRC34P2-201ENST00000514850 553 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 MIR2116-201ENST00000517221 80 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 RNA5SP291-201ENST00000517222 105 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AL137161.1-201ENST00000532231 390 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AL121576.1-201ENST00000556055 276 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AL390240.1-201ENST00000612950 384 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AL357559.1-201ENST00000622228 274 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AC100810.6-201ENST00000638068 285 ntBASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM54Q9BYV2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC010733.2-201ENST00000589496 5702 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 UBE2L2-201ENST00000254302 429 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AL592114.1-201ENST00000403842 483 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 ARL5AP1-201ENST00000418991 388 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC091390.3-201ENST00000426478 338 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 CBWD4P-201ENST00000445695 655 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 RPL39P36-201ENST00000490784 156 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC114786.4-201ENST00000508771 728 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 RNA5SP164-201ENST00000516533 110 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC004024.1-201ENST00000549244 247 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC120057.2-201ENST00000571520 271 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AC018638.8-201ENST00000588755 281 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 BNIP3P9-201ENST00000603714 553 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AL592436.1-201ENST00000605135 558 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AL357078.3-201ENST00000607528 618 ntBASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TRIM54Q9BYV2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC126755.2-208ENST00000327792 462 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC138969.1-213ENST00000331436 462 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 SNORD6-201ENST00000365444 73 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 RNU4-20P-201ENST00000365601 151 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 RNU6-741P-201ENST00000383889 107 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 MIR514A2-201ENST00000385131 88 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 MIR514A3-201ENST00000385132 88 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 RNU6-332P-201ENST00000391193 108 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 RNU4-26P-201ENST00000410270 107 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 EEF1A1P40-201ENST00000412883 573 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 SRIP2-201ENST00000428470 166 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AL162151.2-201ENST00000448875 158 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms