Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL671855.1-201ENST00000446875 1203 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 FCF1P8-201ENST00000510322 597 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 SNORD27.1-201ENST00000516319 72 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 RNU6-1256P-201ENST00000516539 103 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 RNU6-1220P-201ENST00000517126 108 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 MTND1P5-201ENST00000517906 940 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 OR5BN1P-201ENST00000532955 829 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AC005951.1-201ENST00000576706 485 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AC008536.2-201ENST00000607284 349 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 AL110115.1-201ENST00000614396 364 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 FAM35DP-201ENST00000323387 2712 ntBASIC4.23□□□□□ -1.73
RTFDC1Q9BY42 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AF117829.1-206ENST00000621883 3802 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AC018555.1-201ENST00000567548 1980 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 FAM35BP-202ENST00000497389 3337 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 OR4G2P-201ENST00000328113 903 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 Y_RNA.9-201ENST00000362354 101 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 Y_RNA.22-201ENST00000362492 102 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 RNU6-1322P-201ENST00000364309 107 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 RNU4-48P-201ENST00000365559 182 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 MIR454-201ENST00000390180 115 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 U3.26-201ENST00000391236 204 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 CALM2P2-201ENST00000428512 440 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 RPL23AP30-201ENST00000432419 501 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 MTATP6P13-201ENST00000438531 667 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 RPS3AP14-201ENST00000483907 780 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 RPL30P5-201ENST00000494923 336 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 BTF3L4P4-201ENST00000506381 449 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AC027807.1-201ENST00000559921 996 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AL360157.1-201ENST00000565962 87 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 TPRKBP2-201ENST00000565969 475 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 KLKP1-201ENST00000595979 403 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AC107294.1-201ENST00000609524 467 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AL365204.3-201ENST00000612448 685 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 AC130324.3-201ENST00000614165 542 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 U6.114-201ENST00000636407 96 ntBASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.22□□□□□ -1.73
RTFDC1Q9BY42 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
RTFDC1Q9BY42 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
RTFDC1Q9BY42 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RTFDC1Q9BY42 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
RTFDC1Q9BY42 CUL1P1-201ENST00000509510 2425 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 Y_RNA.367-201ENST00000365544 101 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 RNU6-74P-201ENST00000384235 107 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 MIR493-201ENST00000385254 89 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 HSPE1P8-201ENST00000406997 288 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 MTND1P4-201ENST00000435196 415 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 TAAR7P-201ENST00000436141 242 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AF228730.2-201ENST00000438784 848 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 MTATP6P30-201ENST00000443540 664 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AC027673.1-201ENST00000456245 405 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AL356010.1-201ENST00000456364 102 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 RNU7-182P-201ENST00000459009 62 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 RPL27AP5-201ENST00000469428 449 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 RPL31P60-201ENST00000478450 367 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 SNORA31.3-201ENST00000516029 96 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AP006587.4-201ENST00000526053 529 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AP001646.1-201ENST00000527936 915 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 HMGB1P33-201ENST00000563485 527 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AC067852.3-201ENST00000589177 561 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AL391646.1-201ENST00000603860 190 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AP001330.5-201ENST00000607176 411 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AC139792.3-201ENST00000623525 224 ntBASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTFDC1Q9BY42 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms