Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MIR329-1-201ENST00000385028 80 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AL035079.1-201ENST00000405210 287 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC128677.1-201ENST00000436016 442 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 RPS12P17-201ENST00000438591 377 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 IGHV5-78-201ENST00000450948 295 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 RPL31P11-202ENST00000454082 372 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC004129.2-201ENST00000457229 287 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 RNU1-88P-201ENST00000459274 128 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC010265.1-201ENST00000513509 211 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 RN7SKP179-201ENST00000516126 217 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 SNORA74.1-201ENST00000516320 180 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 Y_RNA.709-201ENST00000516952 92 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AP004242.1-201ENST00000533701 349 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC022968.1-201ENST00000567372 442 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC024940.4-201ENST00000605507 246 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 MIR6503-201ENST00000622884 86 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC009812.4-201ENST00000569134 1805 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 ADAM5-202ENST00000399789 1942 ntBASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.29□□□□□ -1.72
SSBP4Q9BWG4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 SNORA21-201ENST00000362423 132 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 Y_RNA.319-201ENST00000365138 92 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 RNU6-1145P-201ENST00000384246 107 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 MIR138-2-201ENST00000384916 84 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 RNU6-1248P-201ENST00000391096 64 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 HLFP1-201ENST00000402375 499 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 PRELID1P1-201ENST00000403549 660 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 CYCSP32-201ENST00000440548 321 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 RPL10P17-201ENST00000453852 316 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 PPIAP21-201ENST00000464473 501 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 DUTP1-201ENST00000493631 470 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 MIR4782-201ENST00000577987 79 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 AP005403.1-201ENST00000579720 229 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 MIR3145-201ENST00000580727 82 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 MIR3658-201ENST00000636291 56 ntBASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSBP4Q9BWG4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SSBP4Q9BWG4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SSBP4Q9BWG4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SSBP4Q9BWG4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 AC099654.2-201ENST00000433031 1980 ntBASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 MAPK10-286ENST00000641208 8747 ntBASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 AC092681.1-201ENST00000297369 291 ntBASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 RNU6-755P-201ENST00000364400 103 ntBASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SSBP4Q9BWG4 AC099336.2-201ENST00000422457 254 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms