Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 Y_RNA.31-201ENST00000362574 102 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 Y_RNA.187-201ENST00000363918 113 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 Y_RNA.197-201ENST00000364004 102 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 SNORA22B-201ENST00000383876 138 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 MIR23B-201ENST00000384832 97 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 RNA5SP219-201ENST00000390940 113 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AL445189.1-201ENST00000405722 338 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AL139396.1-201ENST00000421137 167 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 TRBV1-201ENST00000476502 284 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 GMPSP1-201ENST00000514075 579 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 RNU6-123P-201ENST00000516163 102 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 RNU6-352P-201ENST00000516908 107 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 SNORA31.22-201ENST00000517204 135 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 ERHP1-201ENST00000523006 310 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AP004371.1-201ENST00000525240 214 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 OR8R1P-201ENST00000543943 764 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC135001.1-201ENST00000544546 283 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 RPL23AP84-201ENST00000571193 464 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC022655.2-201ENST00000577280 318 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC104763.2-201ENST00000604179 382 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AL670379.4-201ENST00000605279 254 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AL158032.1-201ENST00000605401 106 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 AC244517.12-201ENST00000623581 663 ntBASIC3.97□□□□□ -1.77
NDC1Q9BTX1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.97□□□□□ -1.77
NDC1Q9BTX1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
NDC1Q9BTX1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.96□□□□□ -1.77
NDC1Q9BTX1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NDC1Q9BTX1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 RNU6-1188P-201ENST00000363795 107 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 U3.15-201ENST00000365398 212 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 RNA5SP235-201ENST00000365411 114 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 SKA2P1-201ENST00000425592 390 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AL353748.1-201ENST00000440753 474 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 RPL32P28-201ENST00000443577 397 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 HMGB3P22-202ENST00000451823 572 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 RPL23AP2-201ENST00000471227 466 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AL132838.2-201ENST00000492041 314 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 RPS27P27-201ENST00000498779 255 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 HIGD1AP13-201ENST00000509878 289 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 IMMP1LP2-201ENST00000552954 492 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AC007151.1-201ENST00000572774 483 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AC138761.3-201ENST00000579993 334 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AC023043.2-201ENST00000589678 1026 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AC008737.2-201ENST00000599446 118 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AL138889.2-201ENST00000603883 242 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AC019193.3-201ENST00000609144 554 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 AC007823.1-201ENST00000569932 1566 ntBASIC3.96□□□□□ -1.78
NDC1Q9BTX1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.96□□□□□ -1.78
NDC1Q9BTX1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC004925.1-201ENST00000624256 2706 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 Y_RNA.145-201ENST00000363527 102 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 SNORD74.4-201ENST00000364129 80 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 Y_RNA.212-201ENST00000364177 102 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RNU6-173P-201ENST00000364215 104 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AL359837.1-201ENST00000381357 287 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RNU6-190P-201ENST00000384154 102 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 MIR513A2-201ENST00000385249 127 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 RNU6-308P-201ENST00000390957 107 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 BX682237.1-201ENST00000415016 335 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AL356095.1-201ENST00000417217 199 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC004552.1-201ENST00000419089 348 ntBASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.95□□□□□ -1.78
NDC1Q9BTX1 PMCHL1-202ENST00000423102 261 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms