Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AP000580.1-201ENST00000404439 358 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 U3.35-201ENST00000408405 208 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AL645608.4-201ENST00000423619 154 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AL353997.1-201ENST00000432936 108 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 RN7SL319P-201ENST00000480656 221 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC022447.4-201ENST00000504053 364 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 APOOP4-201ENST00000513530 597 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AP004371.1-201ENST00000525240 214 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 SNRPGP16-201ENST00000533275 226 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 FKBP1BP1-201ENST00000553366 325 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC007375.1-201ENST00000554513 578 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC005951.2-201ENST00000576282 495 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 LRRC37A5P-203ENST00000580181 585 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC100827.5-201ENST00000615883 426 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AC010615.1-201ENST00000594254 1764 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC092435.4-201ENST00000623012 4159 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC015813.6-201ENST00000624409 5808 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 Y_RNA.126-201ENST00000363382 111 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 Y_RNA.551-201ENST00000384661 102 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 MIR301A-201ENST00000385261 86 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AL030996.1-201ENST00000411430 235 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 RPS12P23-201ENST00000419579 400 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC093162.1-201ENST00000419682 124 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 SNORD127-201ENST00000458892 86 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC020890.1-201ENST00000491837 504 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 RN7SL558P-201ENST00000497468 299 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC008716.1-201ENST00000511084 513 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 FTH1P9-201ENST00000513251 355 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 RNU6-143P-201ENST00000516942 93 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 RN7SKP40-201ENST00000517211 242 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC021006.3-201ENST00000530771 192 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC022968.1-201ENST00000567372 442 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 MIR4273-201ENST00000582824 84 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 MIR6820-201ENST00000611508 62 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 AC032011.1-201ENST00000611703 1549 ntBASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM56Q9BRZ2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 AC027290.2-201ENST00000623210 18662 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 RN7SKP103-201ENST00000363848 320 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 RNU6-933P-201ENST00000384424 107 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 MIR625-201ENST00000385047 85 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 RBMY1KP-201ENST00000423480 476 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 RPS3AP12-201ENST00000443616 753 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 AL445433.1-201ENST00000457507 257 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 MLLT10P2-201ENST00000506434 249 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 RN7SKP147-201ENST00000517154 244 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 MIR3921-201ENST00000577308 85 ntBASIC4.86□□□□□ -1.63
TRIM56Q9BRZ2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms