Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC090337.1-201ENST00000579651 2074 ntBASIC2.73□□□□□ -1.97
VGLL1Q99990 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VGLL1Q99990 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.73□□□□□ -1.97
VGLL1Q99990 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.73□□□□□ -1.97
VGLL1Q99990 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.73□□□□□ -1.97
VGLL1Q99990 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VGLL1Q99990 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VGLL1Q99990 RNU1-75P-201ENST00000347264 129 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 MIR372-201ENST00000362225 67 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RNU6-188P-201ENST00000364207 107 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 Y_RNA.813-201ENST00000364639 102 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 Y_RNA.263-201ENST00000364659 114 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RNU4-20P-201ENST00000365601 151 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VGLL1Q99990 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VGLL1Q99990 SNORA48.8-201ENST00000391324 134 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RPL32P23-201ENST00000397237 405 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 PPIAP31-201ENST00000405422 495 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RNU2-39P-201ENST00000410604 198 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RNU6-55P-201ENST00000411092 107 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 Y_RNA.625-201ENST00000411256 107 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RNU6-954P-201ENST00000411355 107 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.72□□□□□ -1.97
VGLL1Q99990 AC114491.1-201ENST00000416095 246 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 PDCL2P1-201ENST00000419302 352 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RSL24D1P6-201ENST00000426934 401 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AL117339.2-201ENST00000430475 180 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.72□□□□□ -1.97
VGLL1Q99990 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.72□□□□□ -1.97
VGLL1Q99990 AC125238.1-201ENST00000448842 249 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AL118520.1-201ENST00000450770 291 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.72□□□□□ -1.97
VGLL1Q99990 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.72□□□□□ -1.97
VGLL1Q99990 AC006512.1-201ENST00000468816 291 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.72□□□□□ -1.97
VGLL1Q99990 EIF4EP3-201ENST00000498782 656 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RPL38P4-201ENST00000502376 214 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AC026427.2-201ENST00000506228 536 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AC010486.1-201ENST00000511793 424 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.72□□□□□ -1.97
VGLL1Q99990 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.72□□□□□ -1.97
VGLL1Q99990 RNU7-51P-201ENST00000516560 62 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.72□□□□□ -1.97
VGLL1Q99990 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.72□□□□□ -1.97
VGLL1Q99990 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.72□□□□□ -1.97
VGLL1Q99990 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.72□□□□□ -1.97
VGLL1Q99990 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.72□□□□□ -1.97
VGLL1Q99990 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.72□□□□□ -1.97
VGLL1Q99990 MIR4286-201ENST00000580651 93 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 MIR4424-201ENST00000585257 86 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AC021646.1-201ENST00000605469 484 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 TUG1_1.1-201ENST00000610654 145 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AC063943.3-201ENST00000615562 356 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AL450472.3-201ENST00000615578 367 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AL603758.1-201ENST00000618654 241 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 AL359697.1-201ENST00000624879 587 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.72□□□□□ -1.97
VGLL1Q99990 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.72□□□□□ -1.97
VGLL1Q99990 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VGLL1Q99990 MTND5P3-201ENST00000438536 1800 ntBASIC2.72□□□□□ -1.97
VGLL1Q99990 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VGLL1Q99990 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VGLL1Q99990 MTND5P17-201ENST00000418405 1603 ntBASIC2.71□□□□□ -1.97
VGLL1Q99990 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
VGLL1Q99990 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
VGLL1Q99990 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.71□□□□□ -1.98
VGLL1Q99990 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.71□□□□□ -1.98
VGLL1Q99990 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.71□□□□□ -1.98
VGLL1Q99990 Y_RNA.72-201ENST00000362894 103 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 Y_RNA.157-201ENST00000363638 102 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 RNU6-1284P-201ENST00000363701 100 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 RNU6-960P-201ENST00000364056 120 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.71□□□□□ -1.98
VGLL1Q99990 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
VGLL1Q99990 RNU6-629P-201ENST00000384061 103 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 Y_RNA.509-201ENST00000384506 99 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 MIR514A2-201ENST00000385131 88 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 MIR514A3-201ENST00000385132 88 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VGLL1Q99990 RNU6-1009P-201ENST00000390996 107 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 RNU6-903P-201ENST00000391270 109 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 UBE2V1P2-201ENST00000397758 440 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 AL359634.1-202ENST00000404721 284 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 RNU4-65P-201ENST00000410473 140 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 RN7SKP159-201ENST00000410657 292 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 RAB28P1-201ENST00000411517 641 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 UBE2FP1-201ENST00000416536 447 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.71□□□□□ -1.98
VGLL1Q99990 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.71□□□□□ -1.98
VGLL1Q99990 PPP1R11P2-201ENST00000423543 382 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 AC093106.2-201ENST00000428212 385 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VGLL1Q99990 UBE2V1P7-201ENST00000446395 340 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.71□□□□□ -1.98
VGLL1Q99990 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.71□□□□□ -1.98
VGLL1Q99990 RPS29P15-201ENST00000458329 171 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 HMGN2P26-201ENST00000463169 339 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 AC092451.1-201ENST00000480211 153 ntBASIC2.71□□□□□ -1.98
VGLL1Q99990 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VGLL1Q99990 AC116562.3-201ENST00000506136 177 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms