Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR3616-201ENST00000584070 92 ntBASIC1.57□□□□□ -2.16
ABCA3Q99758 VN1R107P-201ENST00000601784 209 ntBASIC1.57□□□□□ -2.16
ABCA3Q99758 AL096840.1-201ENST00000603287 93 ntBASIC1.57□□□□□ -2.16
ABCA3Q99758 AC090525.3-201ENST00000605601 189 ntBASIC1.57□□□□□ -2.16
ABCA3Q99758 AC073111.2-201ENST00000605657 1075 ntBASIC1.57□□□□□ -2.16
ABCA3Q99758 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ABCA3Q99758 AL445493.3-201ENST00000619568 477 ntBASIC1.57□□□□□ -2.16
ABCA3Q99758 AC098657.3-201ENST00000620434 263 ntBASIC1.57□□□□□ -2.16
ABCA3Q99758 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.56□□□□□ -2.16
ABCA3Q99758 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.56□□□□□ -2.16
ABCA3Q99758 CYCSP33-201ENST00000414485 327 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 AC007098.1-201ENST00000420122 367 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 AL445305.1-201ENST00000432577 575 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 AC108120.2-201ENST00000512973 294 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 RNU6-319P-201ENST00000516025 108 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.56□□□□□ -2.16
ABCA3Q99758 AC096772.1-201ENST00000609146 564 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 MFSD8-213ENST00000641134 1327 ntBASIC1.56□□□□□ -2.16
ABCA3Q99758 TMEM167AP1-201ENST00000423409 219 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.55□□□□□ -2.16
ABCA3Q99758 RNF2P1-201ENST00000442955 1010 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 BZW1P2-201ENST00000473537 826 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 SNORA31.18-201ENST00000517043 134 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 AC083923.1-201ENST00000523708 376 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.55□□□□□ -2.16
ABCA3Q99758 AC023825.1-201ENST00000566704 1030 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 AC243773.3-201ENST00000613270 256 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA3Q99758 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.55□□□□□ -2.16
ABCA3Q99758 CCT4P2-201ENST00000233836 1548 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 SGO1P2-201ENST00000429458 1589 ntBASIC1.55□□□□□ -2.16
ABCA3Q99758 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.55□□□□□ -2.16
ABCA3Q99758 RNA5SP257-201ENST00000363023 116 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 RNA5SP62-201ENST00000363457 110 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 RNU6-234P-201ENST00000365229 104 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 NUP35P2-201ENST00000416748 943 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AL645638.1-201ENST00000440519 361 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 GPM6BP3-201ENST00000442797 145 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA3Q99758 TPRKBP1-201ENST00000456243 481 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA3Q99758 RNA5SP384-201ENST00000516615 116 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 RNU6-113P-201ENST00000516653 101 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AC118942.1-201ENST00000529674 1035 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 MIR4714-201ENST00000580728 77 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AC009902.3-201ENST00000606235 2172 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA3Q99758 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA3Q99758 Y_RNA.68-201ENST00000362881 102 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA3Q99758 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA3Q99758 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AC021087.2-201ENST00000504656 1203 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC108078.1-201ENST00000508073 725 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC104108.1-201ENST00000509930 412 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AC008127.2-201ENST00000549925 1075 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.54□□□□□ -2.16
ABCA3Q99758 AL355812.1-201ENST00000603215 216 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC108706.1-201ENST00000611053 297 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 AC073592.7-201ENST00000623659 507 ntBASIC1.54□□□□□ -2.16
ABCA3Q99758 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.54□□□□□ -2.16
ABCA3Q99758 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
ABCA3Q99758 MTND5P10-201ENST00000603719 1809 ntBASIC1.53□□□□□ -2.16
ABCA3Q99758 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA3Q99758 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
ABCA3Q99758 RNA5SP465-201ENST00000391195 109 ntBASIC1.53□□□□□ -2.16
ABCA3Q99758 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.53□□□□□ -2.16
ABCA3Q99758 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA3Q99758 RPS3AP44-201ENST00000425466 790 ntBASIC1.53□□□□□ -2.16
ABCA3Q99758 AL591704.1-201ENST00000432574 275 ntBASIC1.53□□□□□ -2.16
ABCA3Q99758 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA3Q99758 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA3Q99758 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.53□□□□□ -2.16
ABCA3Q99758 AC024619.4-201ENST00000580924 316 ntBASIC1.53□□□□□ -2.16
ABCA3Q99758 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.53□□□□□ -2.16
ABCA3Q99758 AC025588.4-201ENST00000615802 908 ntBASIC1.53□□□□□ -2.16
ABCA3Q99758 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.53□□□□□ -2.16
ABCA3Q99758 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ABCA3Q99758 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
ABCA3Q99758 OR1L1-202ENST00000373686 1083 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 RNU6-837P-201ENST00000391056 108 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA3Q99758 AL691517.1-201ENST00000440833 1235 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA3Q99758 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA3Q99758 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA3Q99758 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.52□□□□□ -2.17
ABCA3Q99758 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.52□□□□□ -2.17
ABCA3Q99758 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.52□□□□□ -2.17
ABCA3Q99758 HMGB1P24-202ENST00000615653 685 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 AC006338.1-201ENST00000618453 749 ntBASIC1.52□□□□□ -2.17
ABCA3Q99758 AC008669.1-201ENST00000565823 2178 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms