Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPL7P27-201ENST00000403775 720 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 AC074117.2-201ENST00000417130 397 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.78□□□□□ -2.12
IFT140Q96RY7 PABPC1P3-201ENST00000469174 459 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 MTCYBP35-201ENST00000503630 1137 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.78□□□□□ -2.12
IFT140Q96RY7 HMGB1P46-201ENST00000520062 610 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.78□□□□□ -2.12
IFT140Q96RY7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.78□□□□□ -2.12
IFT140Q96RY7 MIR3973-201ENST00000579824 107 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 AL138955.1-201ENST00000622881 1040 ntBASIC1.78□□□□□ -2.12
IFT140Q96RY7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
IFT140Q96RY7 MIR1250-201ENST00000408098 113 ntBASIC1.77□□□□□ -2.13
IFT140Q96RY7 SNORD23.1-201ENST00000408212 104 ntBASIC1.77□□□□□ -2.13
IFT140Q96RY7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.77□□□□□ -2.13
IFT140Q96RY7 UBE2V1P6-201ENST00000430840 422 ntBASIC1.77□□□□□ -2.13
IFT140Q96RY7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.77□□□□□ -2.13
IFT140Q96RY7 AC015908.1-201ENST00000478739 476 ntBASIC1.77□□□□□ -2.13
IFT140Q96RY7 OR9N1P-202ENST00000494289 481 ntBASIC1.77□□□□□ -2.13
IFT140Q96RY7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.77□□□□□ -2.13
IFT140Q96RY7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.77□□□□□ -2.13
IFT140Q96RY7 ZNF37BP-203ENST00000452306 1352 ntBASIC1.77□□□□□ -2.13
IFT140Q96RY7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.77□□□□□ -2.13
IFT140Q96RY7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.77□□□□□ -2.13
IFT140Q96RY7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.76□□□□□ -2.13
IFT140Q96RY7 AL596276.1-201ENST00000434465 418 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.76□□□□□ -2.13
IFT140Q96RY7 Z77249.1-201ENST00000444622 1175 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 snoU13.4-201ENST00000458916 104 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 snoU13.7-201ENST00000459220 104 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 AC021382.1-201ENST00000483523 359 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.76□□□□□ -2.13
IFT140Q96RY7 SNORA31.20-201ENST00000517111 133 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 MIR4658-201ENST00000584344 65 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 DPRXP5-201ENST00000604662 539 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.76□□□□□ -2.13
IFT140Q96RY7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.76□□□□□ -2.13
IFT140Q96RY7 AL049737.1-201ENST00000413920 1403 ntBASIC1.76□□□□□ -2.13
IFT140Q96RY7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC105914.1-201ENST00000511798 226 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 RNU6-1308P-201ENST00000516817 103 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC008127.2-201ENST00000549925 1075 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 MIR548Y-201ENST00000582739 110 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC008739.2-201ENST00000597006 317 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 AL096840.1-201ENST00000603287 93 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 ZNF519P1-201ENST00000449011 1626 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 TEX21P-201ENST00000447107 1476 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 RNU4-38P-201ENST00000364472 129 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 RPS27P1-201ENST00000450552 247 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 RNA5SP310-201ENST00000459084 116 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 MRPS17P9-201ENST00000511924 393 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 SETP7-201ENST00000552169 453 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 MIR4714-201ENST00000580728 77 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.75□□□□□ -2.13
IFT140Q96RY7 AC073592.7-201ENST00000623659 507 ntBASIC1.75□□□□□ -2.13
IFT140Q96RY7 RNA5SP252-201ENST00000391131 119 ntBASIC1.74□□□□□ -2.13
IFT140Q96RY7 Z86062.1-201ENST00000406773 777 ntBASIC1.74□□□□□ -2.13
IFT140Q96RY7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.74□□□□□ -2.13
IFT140Q96RY7 COX6CP18-201ENST00000448769 222 ntBASIC1.74□□□□□ -2.13
IFT140Q96RY7 OR6C72P-201ENST00000451403 892 ntBASIC1.74□□□□□ -2.13
IFT140Q96RY7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.74□□□□□ -2.13
IFT140Q96RY7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.74□□□□□ -2.13
IFT140Q96RY7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.74□□□□□ -2.13
IFT140Q96RY7 AL031274.2-201ENST00000599419 203 ntBASIC1.74□□□□□ -2.13
IFT140Q96RY7 U73023.1-201ENST00000603134 700 ntBASIC1.74□□□□□ -2.13
IFT140Q96RY7 AC020658.4-201ENST00000613987 684 ntBASIC1.74□□□□□ -2.13
IFT140Q96RY7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
IFT140Q96RY7 RNU6-1293P-201ENST00000384077 107 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 EZH2P1-201ENST00000431167 291 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 BUD31P2-201ENST00000449374 300 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.73□□□□□ -2.13
IFT140Q96RY7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.73□□□□□ -2.13
IFT140Q96RY7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
IFT140Q96RY7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.73□□□□□ -2.13
IFT140Q96RY7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.73□□□□□ -2.13
IFT140Q96RY7 AC092474.3-201ENST00000603022 568 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 AC108706.1-201ENST00000611053 297 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
IFT140Q96RY7 MIR6076-201ENST00000617521 113 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 AC018755.4-201ENST00000619715 454 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 RNU6-156P-201ENST00000621869 107 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 AC009902.3-201ENST00000606235 2172 ntBASIC1.73□□□□□ -2.13
IFT140Q96RY7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
IFT140Q96RY7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
IFT140Q96RY7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.72□□□□□ -2.13
IFT140Q96RY7 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 MIR193B-201ENST00000384907 83 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 AL353718.1-201ENST00000451028 517 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 AC092989.1-201ENST00000481235 277 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 RPL30P14-201ENST00000482744 348 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 HSBP1P1-201ENST00000555205 166 ntBASIC1.72□□□□□ -2.13
IFT140Q96RY7 AC107954.1-201ENST00000565906 727 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms