Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 Z96811.1-201ENST00000445880 108 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 MIR3122-201ENST00000577243 73 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AL161722.3-201ENST00000605789 2983 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AL390862.1-201ENST00000635467 1469 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 SNORA9.1-201ENST00000362412 131 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 RNU2-40P-201ENST00000410833 196 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 RNA5SP492-201ENST00000411330 114 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 RNA5SP498-201ENST00000411342 120 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AL022718.1-201ENST00000412004 84 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 MTCO3P46-201ENST00000425787 232 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 RPS29P28-201ENST00000446439 141 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AC005908.1-201ENST00000468701 347 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 CD24P2-201ENST00000565486 219 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 HMGB1P24-202ENST00000615653 685 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 MTND4P27-201ENST00000450813 1354 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 Z82195.2-201ENST00000612348 18351 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AL627224.1-201ENST00000448334 444 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AL500527.1-201ENST00000448532 255 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AC104685.1-201ENST00000502445 371 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AL050343.2-201ENST00000607338 280 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 UBE2FP3-201ENST00000436366 524 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 MIR4698-201ENST00000577795 80 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 YWHAQP7-201ENST00000603536 658 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 AC020658.4-201ENST00000613987 684 ntBASIC0.73□□□□□ -2.29
CSMD1Q96PZ7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 HMGB1P9-201ENST00000429856 646 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC009901.1-201ENST00000506703 541 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 RNU6-758P-201ENST00000516292 89 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 MIR4474-201ENST00000579189 78 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC068620.3-201ENST00000602749 560 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC012443.1-201ENST00000605605 231 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AL022238.1-201ENST00000442557 355 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 RPL21P136-201ENST00000605378 396 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 MIR6840-201ENST00000611937 71 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC114546.3-201ENST00000623582 1734 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 ANAPC10P1-201ENST00000395991 556 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 HSPE1P1-201ENST00000421494 318 ntBASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.72□□□□□ -2.29
CSMD1Q96PZ7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC023141.11-201ENST00000508864 202 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC093510.2-201ENST00000562820 896 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC005786.1-201ENST00000588553 154 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 RNU6-146P-201ENST00000384602 108 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 UBE2V1P9-201ENST00000414760 368 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC026801.1-201ENST00000497178 464 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 RNU6-347P-201ENST00000516658 105 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 Y_RNA.18-201ENST00000362461 102 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 RPL23AP32-201ENST00000395315 459 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 GPM6BP3-201ENST00000442797 145 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 MRPL42P6-201ENST00000486397 371 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 Y_RNA.700-201ENST00000516806 100 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 CASP1P1-201ENST00000526345 212 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC022880.1-201ENST00000534017 973 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 SYF2P1-201ENST00000550658 413 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AL078605.1-201ENST00000603529 500 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.71□□□□□ -2.3
CSMD1Q96PZ7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 HSPE1P24-201ENST00000450782 238 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 RNU2-44P-201ENST00000516795 194 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 IGLVI-20-201ENST00000519296 130 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 FAM106CP-201ENST00000582212 507 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AC140725.3-201ENST00000616193 880 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AC091304.6-201ENST00000619761 202 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 SNORA62.1-201ENST00000364287 154 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 Y_RNA.644-201ENST00000459006 113 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AC125611.2-201ENST00000551907 647 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 RNA5SP276-201ENST00000362580 94 ntBASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.7□□□□□ -2.3
CSMD1Q96PZ7 AC009812.4-201ENST00000569134 1805 ntBASIC0.69□□□□□ -2.3
CSMD1Q96PZ7 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
CSMD1Q96PZ7 SNORA67.1-201ENST00000364749 141 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms