Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 U2.10-201ENST00000620268 191 ntBASIC1.27□□□□□ -2.21
AP1S3Q96PC3 LINC02211-204ENST00000642024 1070 ntBASIC1.27□□□□□ -2.21
AP1S3Q96PC3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 MIR126-201ENST00000362291 85 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 RNU1-72P-201ENST00000362976 153 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AL356421.1-201ENST00000403255 413 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 RNU6-516P-201ENST00000411381 104 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AC007742.1-201ENST00000425789 329 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 ELOCP26-201ENST00000436067 329 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AC023790.1-201ENST00000482174 347 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.26□□□□□ -2.21
AP1S3Q96PC3 GAS5-AS1-201ENST00000602767 694 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AC022387.2-201ENST00000604050 448 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AL138963.2-201ENST00000605137 226 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 AC110994.2-201ENST00000635481 492 ntBASIC1.26□□□□□ -2.21
AP1S3Q96PC3 MTCO1P23-201ENST00000415223 1526 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC104454.1-201ENST00000421341 1401 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 RNU1-62P-201ENST00000362599 164 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 SNORA27.3-201ENST00000364937 134 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 SNORD48-201ENST00000364953 64 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 MIR934-201ENST00000401241 83 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 RNU6-77P-201ENST00000410554 91 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 RN7SKP223-201ENST00000410582 62 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 VN1R36P-201ENST00000414936 291 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC008173.1-201ENST00000418901 264 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC018630.2-202ENST00000422992 927 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 BX276092.3-201ENST00000424182 230 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 MED14P1-201ENST00000430517 648 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 MTND6P13-201ENST00000443510 523 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC017007.3-201ENST00000479865 435 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC027575.1-201ENST00000481064 460 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC140059.1-201ENST00000489238 361 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 RNU6-970P-201ENST00000516312 107 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 IGJP1-201ENST00000522682 475 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 HSPA8P13-201ENST00000523715 472 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AL359212.1-201ENST00000556608 614 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC104581.2-201ENST00000572227 430 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 FTX_3.1-201ENST00000610451 147 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 uc_338.5-201ENST00000611839 155 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 AC090617.9-201ENST00000623751 147 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 IGHVIII-44-202ENST00000636235 289 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 Z99571.1-201ENST00000636677 394 ntBASIC1.25□□□□□ -2.21
AP1S3Q96PC3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
AP1S3Q96PC3 MTCO1P18-201ENST00000455518 1419 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 RNA5SP88-201ENST00000365560 109 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 CISD1P1-201ENST00000393907 327 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 MIR888-201ENST00000401186 77 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 USP9YP6-201ENST00000413550 854 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 BPY2DP-201ENST00000422208 265 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AL139415.2-201ENST00000431968 163 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 RPL26P9-201ENST00000457466 433 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 HMGB1P35-201ENST00000503360 598 ntBASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.24□□□□□ -2.21
AP1S3Q96PC3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms