Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 SNRPEP9-201ENST00000436794 238 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC093392.2-201ENST00000450682 337 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 HMGN2P13-201ENST00000476476 274 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 RBBP4P6-201ENST00000508098 202 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC104806.1-201ENST00000508720 308 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 RNU6-914P-201ENST00000516749 109 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC004805.2-201ENST00000605382 482 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 MIR15A-201ENST00000607334 83 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 MIR92B-201ENST00000607575 96 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC068792.1-201ENST00000621354 417 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 AC011155.2-201ENST00000623202 216 ntBASIC3.75□□□□□ -1.81
CCDC138Q96M89 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC138Q96M89 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC138Q96M89 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC138Q96M89 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC138Q96M89 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC027514.1-201ENST00000588561 1603 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 OR4G2P-201ENST00000328113 903 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 Y_RNA.126-201ENST00000363382 111 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 MIR301A-201ENST00000385261 86 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC068050.1-201ENST00000394891 380 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RPL17P50-201ENST00000396131 546 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 SNORA3.3-201ENST00000408712 125 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RN7SKP285-201ENST00000410137 318 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RNU2-68P-201ENST00000410878 191 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 UBE2V1P10-201ENST00000414685 269 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RPL21P109-201ENST00000422213 475 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RPL23AP82-202ENST00000427528 469 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 MTND1P18-201ENST00000448191 573 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 RPS29P15-201ENST00000458329 171 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RNU7-63P-201ENST00000459054 62 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC019235.1-201ENST00000503847 207 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC109927.2-201ENST00000506416 303 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RNA5SP503-201ENST00000517047 117 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 SUMO2P20-201ENST00000520803 283 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC103843.2-201ENST00000530523 682 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AL163153.1-201ENST00000554223 283 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 MIR4286-201ENST00000580651 93 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC004492.1-201ENST00000607036 742 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 U4.5-201ENST00000617137 123 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AL512643.1-201ENST00000635735 524 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 Z99571.1-201ENST00000636677 394 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC068137.3-201ENST00000639191 341 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC073869.6-201ENST00000640656 341 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 AC005183.1-201ENST00000603687 1979 ntBASIC3.74□□□□□ -1.81
CCDC138Q96M89 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC138Q96M89 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC138Q96M89 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC138Q96M89 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 RNU6-1287P-201ENST00000362914 107 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 RNU6-1322P-201ENST00000364309 107 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 RNU6-1060P-201ENST00000384664 107 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC138Q96M89 Y_RNA.599-201ENST00000410489 109 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 Y_RNA.619-201ENST00000410951 90 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 AL031779.1-201ENST00000415663 330 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 MRPL50P2-201ENST00000416821 482 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 RPL36AP53-201ENST00000432891 316 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 HMGB3P8-201ENST00000449709 577 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 ELOCP23-201ENST00000452014 332 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 RPL12P25-201ENST00000455592 494 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms