Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 Y_RNA.128-201ENST00000363391 112 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1013P-201ENST00000384180 107 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1127P-201ENST00000384580 107 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1060P-201ENST00000384664 107 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 MIR548P-201ENST00000408336 84 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNA5SP317-201ENST00000410176 116 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNA5SP311-201ENST00000411290 116 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 ATP5HP2-201ENST00000433885 485 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 BRK1P2-201ENST00000442875 223 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 UQCRHP4-201ENST00000471686 272 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNU6-327P-201ENST00000516270 127 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNA5SP315-201ENST00000516340 116 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RNA5SP312-201ENST00000517068 116 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC025627.2-201ENST00000576220 160 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL670379.6-201ENST00000603753 252 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC008162.1-201ENST00000604718 254 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL670379.1-201ENST00000604752 252 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC012468.1-201ENST00000604888 430 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL670379.5-201ENST00000605253 252 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL670379.8-201ENST00000605353 252 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AL670379.7-201ENST00000605823 252 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 AC084757.4-201ENST00000616350 526 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 DDX10P1-201ENST00000448545 1933 ntBASIC4.6□□□□□ -1.67
CHAMP1Q96JM3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 RNU1-18P-201ENST00000363062 164 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1297P-201ENST00000384415 104 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 RNU6-738P-201ENST00000384531 106 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 SNORA75.4-201ENST00000391278 119 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 PPIAP31-201ENST00000405422 495 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 POLHP1-201ENST00000411806 470 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AL139811.1-201ENST00000424779 2299 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 RPL29P29-201ENST00000448725 423 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 RPS15AP27-201ENST00000449183 343 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC234775.1-201ENST00000454247 670 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 SCARNA18-201ENST00000459004 134 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC004801.2-202ENST00000463559 283 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 HMGB3P15-201ENST00000507326 574 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 RNU6-1045P-201ENST00000516321 107 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AL163153.1-201ENST00000554223 283 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC106871.1-201ENST00000568324 3102 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 MIR3672-201ENST00000584290 82 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC124303.1-201ENST00000605703 360 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC116312.1-201ENST00000606841 314 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 MIR6868-201ENST00000611215 58 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 DUSP12P1-201ENST00000612874 516 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AL450472.3-201ENST00000615578 367 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 AC110801.1-201ENST00000623590 212 ntBASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHAMP1Q96JM3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CHAMP1Q96JM3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CHAMP1Q96JM3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CHAMP1Q96JM3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 MTND4P27-201ENST00000450813 1354 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 MIR369-201ENST00000362155 70 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RNU6-254P-201ENST00000363377 107 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 SNORD113-7-201ENST00000363762 77 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 SNORA63C-201ENST00000364578 129 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 SNORA4.3-201ENST00000365564 137 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 RNA5SP283-201ENST00000365604 119 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 SNORA9-201ENST00000384215 133 ntBASIC4.58□□□□□ -1.68
CHAMP1Q96JM3 MIR548F5-201ENST00000408421 86 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms