Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL7P46-201ENST00000425129 740 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AC093106.2-201ENST00000428212 385 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AC090774.1-201ENST00000435925 246 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AC083863.1-201ENST00000438811 231 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 NUTF2P3-201ENST00000448540 384 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AC010631.1-201ENST00000474150 156 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AP001086.1-201ENST00000494882 321 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.41□□□□□ -1.7
ERCC4Q92889 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AC018630.1-201ENST00000541376 925 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC4Q92889 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.41□□□□□ -1.7
ERCC4Q92889 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC4Q92889 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AL121576.1-201ENST00000556055 276 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AC005668.1-201ENST00000571142 476 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 MIR5047-201ENST00000579212 100 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 BNIP3P25-201ENST00000596023 559 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AC091167.4-201ENST00000605079 184 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AC104237.2-201ENST00000612456 443 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AL390240.1-201ENST00000612950 384 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 MIR8059-201ENST00000620427 81 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AL357559.1-201ENST00000622228 274 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 AL133216.2-202ENST00000634512 349 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC4Q92889 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
ERCC4Q92889 AP004289.2-201ENST00000444413 1457 ntBASIC4.41□□□□□ -1.7
ERCC4Q92889 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
ERCC4Q92889 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.41□□□□□ -1.7
ERCC4Q92889 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ERCC4Q92889 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ERCC4Q92889 GABPAP-201ENST00000419271 1356 ntBASIC4.4□□□□□ -1.7
ERCC4Q92889 MTND4P14-201ENST00000435799 1354 ntBASIC4.4□□□□□ -1.7
ERCC4Q92889 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC4Q92889 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC4Q92889 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC4Q92889 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC4Q92889 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC4Q92889 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC4Q92889 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ERCC4Q92889 AL021368.2-201ENST00000606125 5352 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 RNU6-82P-201ENST00000363970 107 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 Y_RNA.431-201ENST00000384086 102 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 U1.1-201ENST00000384101 164 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AL592114.1-201ENST00000403842 483 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 RNU4-6P-201ENST00000410804 122 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 RNU4-46P-201ENST00000410818 138 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AC068533.1-201ENST00000418542 415 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 USP9YP20-201ENST00000419224 558 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC099677.1-201ENST00000420575 175 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 PPP1R11P2-201ENST00000423543 382 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 RAC1P6-201ENST00000423911 575 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 RPL21P112-201ENST00000434403 463 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC024082.2-201ENST00000434771 238 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.4□□□□□ -1.71
ERCC4Q92889 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AL049830.2-201ENST00000480072 201 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 Y_RNA.654-201ENST00000497848 106 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AC108078.2-201ENST00000510750 236 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC026801.2-201ENST00000515352 425 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 MTND4P7-201ENST00000523876 130 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AP003730.1-201ENST00000524605 285 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AP001804.3-201ENST00000525146 880 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.4□□□□□ -1.71
ERCC4Q92889 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.4□□□□□ -1.71
ERCC4Q92889 MIR5583-1-201ENST00000580941 59 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AC008521.1-201ENST00000587471 187 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ERCC4Q92889 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.4□□□□□ -1.71
ERCC4Q92889 AC022432.1-201ENST00000595739 310 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC020910.2-201ENST00000603635 610 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 HMGN2P28-201ENST00000606102 262 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC092807.2-201ENST00000609367 243 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AL450472.3-201ENST00000615578 367 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 AC110801.1-201ENST00000623590 212 ntBASIC4.4□□□□□ -1.71
ERCC4Q92889 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ERCC4Q92889 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERCC4Q92889 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERCC4Q92889 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ERCC4Q92889 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC4Q92889 SNORA60-201ENST00000362396 134 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 Y_RNA.378-201ENST00000365652 113 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC4Q92889 Y_RNA.419-201ENST00000384041 102 ntBASIC4.39□□□□□ -1.71
ERCC4Q92889 RNU6-837P-201ENST00000391056 108 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms