Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC007998.5-201ENST00000622938 237 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC005858.4-201ENST00000623191 700 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AP000553.6-201ENST00000641242 118 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AL136964.1-201ENST00000622038 2990 ntBASIC3.78□□□□□ -1.81
ATG4AQ8WYN0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.78□□□□□ -1.81
ATG4AQ8WYN0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 MTND4P35-201ENST00000604257 1375 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC009812.4-201ENST00000569134 1805 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 RN7SKP227-201ENST00000364445 330 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 RNU6-522P-201ENST00000364497 107 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 RNA5SP235-201ENST00000365411 114 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 SNORA3.3-201ENST00000408712 125 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 SNORA57.3-201ENST00000411095 141 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 ARL5AP1-201ENST00000418991 388 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC024082.2-201ENST00000434771 238 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 IFNA20P-201ENST00000436840 528 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AL590639.1-201ENST00000456484 337 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC103987.1-201ENST00000473394 348 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 RNU6-685P-201ENST00000517088 95 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 SNORA31.20-201ENST00000517111 133 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 MTND4P7-201ENST00000523876 130 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AP006587.4-201ENST00000526053 529 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 RANP3-201ENST00000530970 276 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AL137161.1-201ENST00000532231 390 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 PSMA3P-201ENST00000555485 635 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC008521.1-201ENST00000587471 187 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC021646.1-201ENST00000605469 484 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AL121757.2-201ENST00000611223 313 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 uc_338.5-201ENST00000611839 155 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AL390240.1-201ENST00000612950 384 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC010133.1-201ENST00000615809 842 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 RNA5SP196-201ENST00000625967 102 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AL732372.2-225ENST00000642124 456 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 AC004925.1-201ENST00000624256 2706 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.77□□□□□ -1.81
ATG4AQ8WYN0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RNU4-76P-201ENST00000364509 141 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RNU6-550P-201ENST00000391057 101 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL592114.1-201ENST00000403842 483 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 MTND3P8-201ENST00000412909 339 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL353678.1-201ENST00000422735 741 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 MTCO1P39-201ENST00000426148 480 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL591419.1-201ENST00000427423 339 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC079780.1-201ENST00000428259 207 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RPL21P112-201ENST00000434403 463 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RPL26P6-201ENST00000440913 438 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC020550.1-201ENST00000447385 163 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 MRPS31P2-201ENST00000451581 518 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RPL21P8-201ENST00000465083 535 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC112206.3-201ENST00000514578 389 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RNU7-30P-201ENST00000516835 62 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RPL7P20-201ENST00000520308 745 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC007991.1-201ENST00000522680 631 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 CYCSP30-201ENST00000546447 172 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 RN7SL703P-201ENST00000578485 302 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC067852.3-201ENST00000589177 561 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 SNRPGP15-201ENST00000600149 222 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL353621.2-201ENST00000605340 133 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AL132765.2-201ENST00000610812 351 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC012409.4-201ENST00000612923 249 ntBASIC3.76□□□□□ -1.81
ATG4AQ8WYN0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms