Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RN7SKP158-201ENST00000410453 326 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 RNU2-28P-201ENST00000410457 189 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC087650.1-201ENST00000431445 468 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 RNU6-333P-201ENST00000459117 107 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 snoU13.7-201ENST00000459220 104 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 GMFBP1-201ENST00000467831 427 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 RPL7P49-201ENST00000471402 708 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC005726.1-201ENST00000494679 427 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 TMEM251P1-201ENST00000503717 318 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC098591.2-201ENST00000510152 315 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 Y_RNA.682-201ENST00000516457 100 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 SCARNA24.1-201ENST00000516465 137 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 RNU6-406P-201ENST00000516470 107 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 COX6CP8-201ENST00000522620 226 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 OR4R1P-201ENST00000529879 463 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 OR4T1P-201ENST00000554933 911 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 SAGE4P-201ENST00000442271 3381 ntBASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SH3RF3Q8TEJ3 LINC02471-203ENST00000641941 4752 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RNU5E-8P-201ENST00000363502 116 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RNU6-1188P-201ENST00000363795 107 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 MIR153-1-201ENST00000384914 90 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RNA5SP424-201ENST00000390988 115 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 MCFD2P1-201ENST00000417812 300 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC018865.2-201ENST00000423631 129 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 MTCYBP10-201ENST00000424905 650 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RPL7L1P10-201ENST00000427790 463 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RPS24P13-201ENST00000442520 397 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 DDX3P2-201ENST00000446138 111 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL035666.1-201ENST00000446195 348 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RPL21P71-201ENST00000465598 459 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RPS15AP17-201ENST00000470598 390 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 TRBV1-201ENST00000476502 284 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 TRBV12-2-201ENST00000489763 344 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 MTCYBP40-201ENST00000509390 1135 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC004062.1-201ENST00000509926 645 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RNU4-29P-201ENST00000515943 174 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC104986.1-201ENST00000517978 436 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 MYL12AP1-201ENST00000518490 515 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC009902.1-201ENST00000519351 183 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AP001029.3-201ENST00000588063 596 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC005357.1-201ENST00000588399 301 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL670379.11-201ENST00000604059 253 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL670379.10-201ENST00000604330 253 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC012468.1-201ENST00000604888 430 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL670379.12-201ENST00000605291 253 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL670379.9-201ENST00000605428 253 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 RNA5SP108-201ENST00000605921 117 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 OR10AB1P-201ENST00000609613 938 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AC019176.2-201ENST00000611579 315 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL157817.1-201ENST00000614264 790 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 AL357559.1-201ENST00000622228 274 ntBASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3RF3Q8TEJ3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms