Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC018692.3-201ENST00000623929 123 ntBASIC3.38□□□□□ -1.87
LMO3Q8TAP4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.38□□□□□ -1.87
LMO3Q8TAP4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.157-201ENST00000363638 102 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 RNY1P12-201ENST00000364251 105 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 RNU4-47P-201ENST00000410876 114 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 RNU6-373P-201ENST00000411247 98 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 EEF1A1P40-201ENST00000412883 573 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 RPL31P2-201ENST00000413849 377 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC007390.1-201ENST00000415722 356 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 PDCL2P1-201ENST00000419302 352 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 RPS15AP6-201ENST00000420703 385 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 OR2AS1P-201ENST00000427827 319 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 GPR143P-201ENST00000434155 205 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 RPL7P52-201ENST00000449200 742 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 RPS20P24-201ENST00000457473 361 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 SCARNA24.1-201ENST00000516465 137 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AP000907.2-201ENST00000530827 353 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 KC877982.1-201ENST00000602313 470 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC013553.2-201ENST00000604244 589 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 Z84480.1-201ENST00000605131 311 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 PHKBP1-201ENST00000450951 1951 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC011460.1-201ENST00000636268 1834 ntBASIC3.37□□□□□ -1.87
LMO3Q8TAP4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LMO3Q8TAP4 AC007529.1-201ENST00000418574 2178 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 Y_RNA.166-201ENST00000363730 102 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 SNORD81.2-201ENST00000365153 76 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 MIR1-2-201ENST00000384961 85 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 U3.20-201ENST00000390909 217 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL159169.1-201ENST00000421119 127 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL158156.1-201ENST00000422509 473 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 RPL23AP30-201ENST00000432419 501 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 TIMM9P1-201ENST00000436122 256 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC127537.2-201ENST00000439258 465 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 TXNP1-201ENST00000441872 371 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC079781.2-201ENST00000446424 169 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL358232.1-201ENST00000448030 501 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL353691.1-201ENST00000451332 387 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC104308.1-201ENST00000454621 333 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AL356010.1-201ENST00000456364 102 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 SNORD121B-201ENST00000458838 81 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 snoU13.8-201ENST00000458890 104 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 RN7SL863P-201ENST00000462370 296 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC021382.1-201ENST00000483523 359 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC060771.1-201ENST00000582031 164 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 UBL5P2-201ENST00000583788 219 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 VN1R80P-201ENST00000597126 338 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC068790.3-201ENST00000602988 553 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 AC010680.3-201ENST00000604215 520 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 YPEL5P2-201ENST00000605553 359 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 MIR8058-201ENST00000615737 89 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 uc_338.12-201ENST00000616344 181 ntBASIC3.36□□□□□ -1.87
LMO3Q8TAP4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.36□□□□□ -1.87
LMO3Q8TAP4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms