Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 COX6CP14-201ENST00000469580 174 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 SNORD116-28-201ENST00000516123 91 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 RNU6-919P-201ENST00000516731 104 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 RNU6-798P-201ENST00000516912 103 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AL158827.2-201ENST00000602494 330 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AL691447.3-201ENST00000635020 330 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 AL445437.1-201ENST00000623157 3087 ntBASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NEDD1Q8NHV4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AL022322.2-201ENST00000624072 20397 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 RNU4-44P-201ENST00000363050 141 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 RNA5SP205-201ENST00000364653 136 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 Y_RNA.497-201ENST00000384447 98 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 MIR628-201ENST00000385229 95 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 Y_RNA.592-201ENST00000410274 109 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 Y_RNA.597-201ENST00000410463 100 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AL356387.2-201ENST00000422272 243 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 RPL35AP22-201ENST00000436855 335 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AL513124.1-201ENST00000450410 614 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 SNORD97-201ENST00000459187 142 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC114982.1-201ENST00000469402 321 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC087190.1-201ENST00000484462 480 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC107032.1-201ENST00000485945 480 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC140059.1-201ENST00000489238 361 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 SNORA72.7-201ENST00000516349 94 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC104576.1-201ENST00000524225 88 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AL133271.1-201ENST00000538229 291 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AMZ2P1-203ENST00000565833 850 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 MIR4277-201ENST00000578298 84 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 MIR4472-2-201ENST00000582069 67 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 AC104260.2-201ENST00000623551 3497 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 CPHL1P-201ENST00000461341 3407 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 SMG1P4-204ENST00000523028 4131 ntBASIC5.34□□□□□ -1.55
NEDD1Q8NHV4 Z95331.1-201ENST00000623075 23112 ntBASIC5.34□□□□□ -1.56
NEDD1Q8NHV4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
NEDD1Q8NHV4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NEDD1Q8NHV4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 LINC02555-201ENST00000563933 1951 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 SMIM11P1-201ENST00000369586 178 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 RNU6-946P-201ENST00000383878 107 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 SNORA69.1-201ENST00000390904 137 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 RNU6-918P-201ENST00000391219 106 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 MTND3P9-201ENST00000429526 346 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 ELOCP18-201ENST00000434209 337 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AL589765.3-201ENST00000446084 462 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AC022431.1-201ENST00000450941 438 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 RPL21P126-201ENST00000470049 478 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 NIP7P2-201ENST00000485801 544 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 RPL23AP55-201ENST00000498163 452 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 MIR5701-3-201ENST00000578890 82 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 MIR5701-1-201ENST00000585138 82 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AC108706.1-201ENST00000611053 297 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 MIR5701-2-201ENST00000615634 82 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 Z75746.1-201ENST00000440243 2080 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 EXOC5P1-201ENST00000510543 1969 ntBASIC5.33□□□□□ -1.56
NEDD1Q8NHV4 AC133552.1-201ENST00000569988 4007 ntBASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD1Q8NHV4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms