Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC116337.1-201ENST00000509680 687 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC022634.1-201ENST00000520765 532 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 CR383656.7-201ENST00000548164 174 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC008127.2-201ENST00000549925 1075 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC025588.2-201ENST00000604851 466 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AC107214.2-201ENST00000608204 634 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AL353997.5-201ENST00000618886 171 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 YWHAEP7-203ENST00000622054 312 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 DBF4P1-201ENST00000412976 1892 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
CCDC112Q8NEF3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 MIR16-2-201ENST00000362117 81 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AL023284.1-201ENST00000403956 276 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AL133264.1-201ENST00000407157 562 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 RNU2-20P-201ENST00000410425 191 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 TAF13P2-201ENST00000416876 286 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AL512637.2-201ENST00000431287 1256 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AL445646.1-201ENST00000431784 216 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 Z80107.1-201ENST00000436830 412 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 THAP5P1-201ENST00000439089 262 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 MTND2P30-201ENST00000456663 382 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 LARP1BP2-201ENST00000486594 519 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC068781.1-201ENST00000488231 618 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC023141.11-201ENST00000508864 202 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC117522.2-201ENST00000510049 657 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 SNORA31.23-201ENST00000517219 133 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC026616.1-201ENST00000523157 525 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC007375.1-201ENST00000554513 578 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 LINC00557-201ENST00000563184 1279 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 MIR4666A-201ENST00000580160 79 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 MIR3618-201ENST00000580330 88 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AP002906.1-201ENST00000603405 233 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC021749.1-201ENST00000604322 607 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 AC091932.3-201ENST00000624223 323 ntBASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CCDC112Q8NEF3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 SNORD48-201ENST00000364953 64 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 RNU6-549P-201ENST00000384433 107 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 RNU6-878P-201ENST00000384578 110 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 MIR764-201ENST00000390811 85 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 TMSB4XP8-201ENST00000402089 135 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 TMSB4XP6-201ENST00000415187 135 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 BEND7P1-201ENST00000422058 457 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 TMSB4XP1-201ENST00000424567 135 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 USP9YP34-201ENST00000453983 808 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 COX7A2P2-201ENST00000505291 250 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 AC091860.1-201ENST00000505723 432 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 RNU6-295P-201ENST00000516901 104 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 AP002748.2-201ENST00000528671 348 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC112Q8NEF3 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 MIR5571-201ENST00000577998 113 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 AL161423.1-201ENST00000613700 262 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 AP001486.3-201ENST00000615334 372 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 AC097460.3-201ENST00000623099 442 ntBASIC2□□□□□ -2.09
CCDC112Q8NEF3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC112Q8NEF3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2□□□□□ -2.09
CCDC112Q8NEF3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC011477.1-204ENST00000623416 1325 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 COX6CP18-201ENST00000448769 222 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 ATG12P2-201ENST00000456830 416 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 BZW1P2-201ENST00000473537 826 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms