Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AL158211.2-201ENST00000607282 395 ntBASIC2.21□□□□□ -2.06
TRAM1L1Q8N609 AL138478.1-201ENST00000612252 832 ntBASIC2.21□□□□□ -2.06
TRAM1L1Q8N609 HMGB1P24-202ENST00000615653 685 ntBASIC2.21□□□□□ -2.06
TRAM1L1Q8N609 AL449363.1-201ENST00000617815 186 ntBASIC2.21□□□□□ -2.06
TRAM1L1Q8N609 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
TRAM1L1Q8N609 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAM1L1Q8N609 AL160394.1-201ENST00000624765 724 ntBASIC2.21□□□□□ -2.06
TRAM1L1Q8N609 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 ZNF658B-202ENST00000615961 3375 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 Y_RNA.408-201ENST00000383987 102 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 RNU6-750P-201ENST00000390946 107 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 RNA5SP425-201ENST00000410336 112 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC023141.4-201ENST00000412031 328 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 MTCO3P30-201ENST00000426425 670 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 ATP5F1P1-201ENST00000433775 569 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC092902.1-201ENST00000486999 259 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AP000889.2-201ENST00000532684 490 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC078814.3-201ENST00000553036 491 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC091544.4-201ENST00000555268 342 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC104072.1-201ENST00000568817 668 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 RPS3AP23-202ENST00000574601 686 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC024060.1-201ENST00000607052 494 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC009237.15-201ENST00000610252 501 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAM1L1Q8N609 AC011477.1-204ENST00000623416 1325 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 RNA5SP126-201ENST00000365092 109 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 RNU6-224P-201ENST00000384055 107 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 RNU6-1207P-201ENST00000384343 107 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 SNORA40.2-201ENST00000390847 128 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AL590084.2-201ENST00000401481 382 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 BX119904.4-201ENST00000424402 301 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 IPO7P1-201ENST00000442031 636 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AC107222.1-201ENST00000510899 637 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 MIR1273D-201ENST00000577266 86 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AC002545.1-201ENST00000592511 181 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AC004987.4-201ENST00000603383 338 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 AC239868.4-201ENST00000608318 671 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 MIR6873-201ENST00000622788 63 ntBASIC2.19□□□□□ -2.06
TRAM1L1Q8N609 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 RNU1-39P-201ENST00000383897 165 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AL590084.1-201ENST00000407885 387 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 RNU2-49P-201ENST00000410666 184 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 USP9YP27-201ENST00000418455 438 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 TIMM9P2-201ENST00000419324 266 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 OSTCP8-201ENST00000445117 448 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 HMGN1P5-201ENST00000448591 263 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC104563.1-201ENST00000476147 376 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC113347.3-201ENST00000509113 148 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC098591.2-201ENST00000510152 315 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC112198.4-201ENST00000515450 351 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 HMGN1P28-201ENST00000521340 364 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC025594.3-201ENST00000613068 790 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC010133.1-201ENST00000615809 842 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC068057.2-201ENST00000624047 895 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 AC126544.2-201ENST00000625174 749 ntBASIC2.18□□□□□ -2.06
TRAM1L1Q8N609 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms