Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 U8.14-201ENST00000390843 143 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 SFR1P1-201ENST00000403720 688 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC087343.1-201ENST00000477341 475 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.63□□□□□ -2.15
VPS8Q8N3P4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS8Q8N3P4 HSBP1P1-201ENST00000555205 166 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC025165.5-201ENST00000602802 578 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 MTND4P31-201ENST00000425607 1343 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC087359.1-201ENST00000508335 1740 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.62□□□□□ -2.15
VPS8Q8N3P4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AL356432.1-201ENST00000405809 419 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AC009238.1-201ENST00000442165 424 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AC009237.6-201ENST00000446969 424 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AC006390.1-201ENST00000508068 283 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AP005902.1-201ENST00000521358 186 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AC004852.3-201ENST00000614131 326 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 AC106730.3-201ENST00000624568 641 ntBASIC1.62□□□□□ -2.15
VPS8Q8N3P4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 RNU6-1032P-201ENST00000384100 107 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AC004383.1-201ENST00000438135 289 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 GDI2P2-201ENST00000445131 608 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AC016065.2-201ENST00000514530 444 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 IGKV2D-36-201ENST00000518643 226 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 EIF4EP5-201ENST00000528228 640 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AC005498.1-201ENST00000592125 465 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AC123912.5-201ENST00000605470 343 ntBASIC1.61□□□□□ -2.15
VPS8Q8N3P4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS8Q8N3P4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 MIR373-201ENST00000362273 69 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 RNU1-148P-201ENST00000384472 162 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 MIR493-201ENST00000385254 89 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AL161449.1-201ENST00000414531 1199 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 MTCO3P4-201ENST00000419236 787 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 MTCO3P46-201ENST00000425787 232 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 MTATP6P7-201ENST00000453315 681 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 SNORD97-201ENST00000459187 142 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AC055731.1-201ENST00000474387 401 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AC026801.1-201ENST00000497178 464 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 PCNAP1-201ENST00000505363 709 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS8Q8N3P4 RN7SKP179-201ENST00000516126 217 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AC040174.2-201ENST00000602701 465 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 MIR7515-201ENST00000637837 67 ntBASIC1.6□□□□□ -2.15
VPS8Q8N3P4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VPS8Q8N3P4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 AL009174.1-201ENST00000426577 416 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 MTCO1P48-201ENST00000448024 1096 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS8Q8N3P4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.59□□□□□ -2.15
VPS8Q8N3P4 PNPLA4P1-201ENST00000458328 305 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.59□□□□□ -2.15
VPS8Q8N3P4 AP005660.1-201ENST00000522972 293 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.59□□□□□ -2.15
VPS8Q8N3P4 MIR4295-201ENST00000585286 85 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 RN7SL622P-201ENST00000585292 275 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VPS8Q8N3P4 AC022709.1-201ENST00000615967 87 ntBASIC1.59□□□□□ -2.15
VPS8Q8N3P4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
VPS8Q8N3P4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
VPS8Q8N3P4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VPS8Q8N3P4 RNU4-42P-201ENST00000364738 142 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 FCF1P2-201ENST00000415284 583 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 AL365496.1-201ENST00000426885 215 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 MTCYBP12-201ENST00000440559 1134 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 TPTE2P6-202ENST00000445572 1007 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 HMGN2P10-201ENST00000448085 265 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 AL359385.1-201ENST00000456509 365 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.58□□□□□ -2.16
VPS8Q8N3P4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS8Q8N3P4 AC093770.1-201ENST00000511559 571 ntBASIC1.58□□□□□ -2.16
VPS8Q8N3P4 AF131216.2-201ENST00000512316 564 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms