Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RNU6-960P-201ENST00000364056 120 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RNU6-7-201ENST00000364784 107 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RNU6-8-201ENST00000365467 107 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RNU5E-6P-201ENST00000365574 115 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 Y_RNA.582-201ENST00000391023 95 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC006989.1-201ENST00000427212 131 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AL158071.1-201ENST00000430315 461 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 FCF1P1-201ENST00000432690 571 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RPS29P31-201ENST00000446147 164 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC079781.2-201ENST00000446424 169 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 SNRPGP6-201ENST00000451124 220 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 SSXP4-201ENST00000451349 245 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC013267.1-201ENST00000458227 267 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RPS3AP17-201ENST00000472594 777 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RNU6-927P-201ENST00000516199 100 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 MIR3167-201ENST00000579623 85 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AL033523.1-201ENST00000605153 153 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC090132.2-201ENST00000615881 347 ntBASIC3.67□□□□□ -1.82
HERC6Q8IVU3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC092447.7-201ENST00000422212 1621 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 RNU6-328P-201ENST00000390887 106 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 RPS4XP3-201ENST00000398541 413 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AL138885.1-201ENST00000405921 675 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 RNU2-36P-201ENST00000410361 191 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC063979.1-201ENST00000415539 377 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 MTND3P17-201ENST00000416968 344 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 OR2AS1P-201ENST00000427827 319 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC133104.1-201ENST00000429100 218 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 RPL31P35-201ENST00000431058 377 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AL031667.1-201ENST00000440222 725 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC025750.2-201ENST00000442609 450 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 GAPDHP27-201ENST00000447427 1020 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 RNU6-953P-201ENST00000459154 107 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC022616.3-201ENST00000523940 148 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC034105.3-201ENST00000565294 442 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 MTND1P15-201ENST00000579262 949 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AL162713.1-201ENST00000604480 262 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AL161729.4-201ENST00000604650 476 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC008962.1-201ENST00000605729 304 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC013562.2-201ENST00000611632 603 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 RNVU1-4-201ENST00000612985 164 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC068831.7-201ENST00000616954 363 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 AC007998.5-201ENST00000622938 237 ntBASIC3.66□□□□□ -1.82
HERC6Q8IVU3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HERC6Q8IVU3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.65□□□□□ -1.82
HERC6Q8IVU3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HERC6Q8IVU3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
HERC6Q8IVU3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.65□□□□□ -1.82
HERC6Q8IVU3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HERC6Q8IVU3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HERC6Q8IVU3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.65□□□□□ -1.82
HERC6Q8IVU3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 RPL7P26-201ENST00000333817 754 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 RNU1-140P-201ENST00000365040 165 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 RNU6-701P-201ENST00000384059 107 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 SNORA44-201ENST00000384584 132 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms