Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
CCDC50Q8IVM0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC50Q8IVM0 AC009902.3-201ENST00000606235 2172 ntBASIC2.54□□□□□ -2
CCDC50Q8IVM0 ZNF519P1-201ENST00000449011 1626 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC50Q8IVM0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC50Q8IVM0 RNU6-433P-201ENST00000363216 104 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 RNU6-741P-201ENST00000383889 107 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 RNU6-83P-201ENST00000384568 112 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 RNA5SP354-201ENST00000391247 136 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC119751.3-201ENST00000399720 670 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 MTND1P21-201ENST00000412991 285 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC106883.1-201ENST00000418805 562 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC083875.1-201ENST00000419509 405 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 MTND1P9-201ENST00000453775 944 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 RNU7-23P-201ENST00000459465 62 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 RPS15AP34-201ENST00000487776 387 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 HSPE1P23-201ENST00000509838 286 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC112673.1-201ENST00000513168 575 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 RNA5SP471-201ENST00000516971 106 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC50Q8IVM0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC50Q8IVM0 AL049838.1-201ENST00000563647 981 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC136601.2-201ENST00000604356 474 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AL136363.1-201ENST00000605349 337 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC097468.3-201ENST00000607956 456 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC097478.2-201ENST00000610572 514 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 SDR42E1P2-201ENST00000614861 481 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.53□□□□□ -2
CCDC50Q8IVM0 U4.3-201ENST00000621047 82 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AL078595.3-201ENST00000623815 1166 ntBASIC2.53□□□□□ -2
CCDC50Q8IVM0 AC069528.2-201ENST00000624849 1991 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 RNU6-462P-201ENST00000362659 105 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 SNORA5B-201ENST00000363786 132 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 RNU6-301P-201ENST00000384277 107 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 RNU6-140P-201ENST00000384566 108 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 CCNG1P1-201ENST00000406783 885 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 SSR1P2-201ENST00000415208 787 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 MTND1P23-201ENST00000416931 372 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 FCF1P1-201ENST00000432690 571 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 DPPA3P1-201ENST00000448050 469 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 RPL31P41-201ENST00000477967 372 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 MRPS36P2-201ENST00000512569 299 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC002545.1-201ENST00000592511 181 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC092106.3-201ENST00000611308 722 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 AC012150.2-201ENST00000621300 544 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 PCMTD1P7-201ENST00000634506 357 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 MIR4275-201ENST00000636486 87 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 MTND5P33-201ENST00000571250 1450 ntBASIC2.52□□□□□ -2.01
CCDC50Q8IVM0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 RNA5SP37-201ENST00000365420 130 ntBASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 RNU2-33P-201ENST00000410344 192 ntBASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 WARS2P1-201ENST00000429678 537 ntBASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 AC010153.1-201ENST00000432862 727 ntBASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 FAM103A2P-201ENST00000444122 354 ntBASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 DUXAP8-207ENST00000456786 622 ntBASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC50Q8IVM0 AC093809.1-201ENST00000509155 340 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms